RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TLR8Q9NR97 1041 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 IGSF5Q9NSI5 407 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 GALPQ9UBC7 116 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 DOCK4Q8N1I0 1966 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.9□□□□□ -0.99
SNCA-201ENST00000336904 CCDC162PA2VCL2 907 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 WFS1O76024 890 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 SUPT7LO94864 414 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 SEC24AO95486 1093 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 GALTP07902 379 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 ZCCHC18P0CG32 403 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 ANPEPP15144 967 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 RHOQP17081 205 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 AOC1P19801 751 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 TACR2P21452 398 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 PIK3R1P27986 724 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 HOXC13P31276 330 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 CBLBQ13191 982 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 NAB1Q13506 487 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 INSCQ1MX18 579 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 ANO7Q6IWH7 933 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 IZUMO2Q6UXV1 221 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 ATP6V0D2Q8N8Y2 350 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.99
SNCA-201ENST00000336904 APBB2Q92870 758 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 BTN2A3PQ96KV6 586 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 DEFB118Q96PH6 123 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 RNF38Q9H0F5 515 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 FBXO44Q9H4M3 255 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 IL1RL2Q9HB29 575 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 UTP6Q9NYH9 597 aaKnown RBP8.9□□□□□ -0.99
SNCA-201ENST00000336904 NCKIPSDQ9NZQ3 722 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 CDH22Q9UJ99 828 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 RAD54BQ9Y620 910 aa8.9□□□□□ -0.99
SNCA-201ENST00000336904 CCDC189A1A4V9 331 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 SLC38A8A6NNN8 435 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 IQCF5A8MTL0 148 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 MATN2O00339 956 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 FAM163BP0C2L3 166 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 GJA1P17302 382 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 FMO4P31512 558 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 DPP6P42658 865 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 SLC34A1Q06495 639 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ASPHQ12797 758 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 KIAA1841Q6NSI8 718 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 TIGD7Q6NT04 549 aaPredicted RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 PAF1Q8N7H5 531 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ENDOVQ8N8Q3 282 aaKnown RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 FBXO22Q8NEZ5 403 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ST13P5Q8NFI4 369 aaPredicted RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 PTERQ96BW5 349 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 PRICKLE1Q96MT3 831 aaPredicted RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 HBEGFQ99075 208 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 VN1R3Q9BXE9 311 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 TM6SF2Q9BZW4 377 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 UNC93B1Q9H1C4 597 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 DNAJC28Q9NX36 388 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNCA-201ENST00000336904 CCDC167Q9P0B6 97 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 A8MT66 165 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 K7ERQ8 282 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 UBXN8O00124 270 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 UBFD1O14562 309 aaKnown RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 LDB2O43679 373 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CACNG3O60359 315 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 OR1I1O60431 355 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 KLHL2O95198 593 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 EOMESO95936 686 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 SELPP16109 830 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CTPS1P17812 591 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ITGB6P18564 788 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 PEX19P40855 299 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 NSUN2Q08J23 767 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNCA-201ENST00000336904 RALGDSQ12967 914 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CCNIQ14094 377 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 FSCBQ5H9T9 825 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 AFMIDQ63HM1 303 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ZNF549Q6P9A3 640 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 POTEHQ6S545 545 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CILP2Q8IUL8 1156 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNCA-201ENST00000336904 LZTR1Q8N653 840 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 LPCAT1Q8NF37 534 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 OR6Y1Q8NGX8 325 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 RAB3IL1Q8TBN0 382 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ISL2Q96A47 359 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 ZNF333Q96JL9 665 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 DRC3Q9H069 523 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 HMX1Q9NP08 348 aaPredicted RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 TMEM248Q9NWD8 314 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 TMEM161AQ9NX61 479 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.89□□□□□ -0.99
SNCA-201ENST00000336904 STOML1Q9UBI4 398 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 IKZF3Q9UKT9 509 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 BTRCQ9Y297 605 aa8.89□□□□□ -0.99
SNCA-201ENST00000336904 HEATR9A2RTY3 570 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 TARM1B6A8C7 271 aa8.88□□□□□ -0.99
SNCA-201ENST00000336904 F5H5T6 163 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms