RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 IFITM2Q01629 132 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 SOX4Q06945 474 aaPredicted RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 SUZ12Q15022 739 aaKnown RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 KYQ8NBH2 561 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 BHLHE22Q8NFJ8 381 aaPredicted RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 SUN5Q8TC36 379 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 NDRG1Q92597 394 aaKnown RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 YTHDF1Q9BYJ9 559 aaKnown RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 HMG20AQ9NP66 347 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 MRPL40Q9NQ50 206 aaKnown RBP20.76■□□□□ 0.91
SPNS1-203ENST00000334536 RNF19AQ9NV58 838 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 SLC17A6Q9P2U8 582 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 COPG2Q9UBF2 871 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 PSAT1Q9Y617 370 aa20.76■□□□□ 0.91
SPNS1-203ENST00000334536 FAM172BPA6NC97 362 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 C9IYK1 514 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 AP2A1O95782 977 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 PRKCGP05129 697 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 UBL4AP11441 157 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 CD247P20963 164 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ME2P23368 584 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 MZF1P28698 734 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 GJA9P57773 515 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 PITX1P78337 314 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ADAM17P78536 824 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 RFTN1Q14699 578 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 GALNT18Q6P9A2 607 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 PAQR9Q6ZVX9 377 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 USP43Q70EL4 1123 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 DCP2Q8IU60 420 aaKnown RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 PGAM4Q8N0Y7 254 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 DUS3LQ96G46 650 aaKnown RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 UHRF1Q96T88 793 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 HOXD1Q9GZZ0 328 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 COQ10BQ9H8M1 238 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 BFARQ9NZS9 450 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 KLHL8Q9P2G9 620 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 VPS51Q9UID3 782 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 POU2F3Q9UKI9 436 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 DYTNA2CJ06 578 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 NUAK1O60285 661 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 KLHL41O60662 606 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 KCNA4P22459 653 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 MYF6P23409 242 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 NUMBP49757 651 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ZNF135P52742 658 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 CSE1LP55060 971 aaKnown RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ABCE1P61221 599 aaKnown RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 KLF10Q13118 480 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 IRF5Q13568 498 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 RAB39AQ14964 217 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 GPR107Q5VW38 600 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 BSPRYQ5W0U4 402 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 FAM117BQ6P1L5 589 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ANKRD13BQ86YJ7 626 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 C10orf107Q8IVU9 208 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 S100ZQ8WXG8 99 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 RBBP8Q99708 897 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 GPN2Q9H9Y4 310 aaPredicted RBP20.75■□□□□ 0.91
SPNS1-203ENST00000334536 ARMC1Q9NVT9 282 aa20.75■□□□□ 0.91
SPNS1-203ENST00000334536 MAGEB16A2A368 324 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 GABRDO14764 452 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 HTRA2O43464 458 aaPredicted RBP20.74■□□□□ 0.91
SPNS1-203ENST00000334536 LYPLA1O75608 230 aaPredicted RBP20.74■□□□□ 0.91
SPNS1-203ENST00000334536 MPOP05164 745 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 ERVK-10P10266 1014 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 RALBP11234 206 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 TGM1P22735 817 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 PTPN3P26045 913 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 THOP1P52888 689 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 CDH15P55291 814 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 SEMA3BQ13214 749 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 ARHGEF6Q15052 776 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 CLEC20AQ6ZU45 233 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 PLEKHH3Q7Z736 793 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 GRIN3AQ8TCU5 1115 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 DNAJB3Q8WWF6 145 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 TFAP2CQ92754 450 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 ZNF486Q96H40 463 aaPredicted RBP20.74■□□□□ 0.91
SPNS1-203ENST00000334536 TXNDC15Q96J42 360 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 CNDP1Q96KN2 507 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 CASS4Q9NQ75 786 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 PIGVQ9NUD9 493 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 TMEM216Q9P0N5 145 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 TRHDEQ9UKU6 1024 aa20.74■□□□□ 0.91
SPNS1-203ENST00000334536 GUCY1B2O75343 617 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 JRKO75564 520 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 RNASEH2AO75792 299 aaKnown RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 NTRK1P04629 796 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 ERCC2P18074 760 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 XRCC1P18887 633 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 ADSLP30566 484 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 GTF2A2P52657 109 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 LIMK2P53671 638 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 NME3Q13232 169 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TUBA3CQ13748 450 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MFSD10Q14728 455 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 NHSL2Q5HYW2 709 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms