RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 EML3Q32P44 896 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 CHSY3Q70JA7 882 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 ZNF354CQ86Y25 554 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 OR6P1Q8NGX9 317 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 ANKRD49Q8WVL7 239 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 MEAF6Q9HAF1 191 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 RIMS3Q9UJD0 308 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 TLL2Q9Y6L7 1015 aa23.52■■□□□ 1.36
NDEL1-201ENST00000334527 TTC24A2A3L6 582 aaPredicted RBP23.51■■□□□ 1.35
NDEL1-201ENST00000334527 CNTN5O94779 1100 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 MMP2P08253 660 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 CHN2P52757 468 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 RASIP1Q5U651 963 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 UGT2A3Q6UWM9 527 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 LDB1Q86U70 411 aaPredicted RBP23.51■■□□□ 1.35
NDEL1-201ENST00000334527 MON1AQ86VX9 555 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 DLG3Q92796 817 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 SLC39A13Q96H72 371 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 UBXN10Q96LJ8 280 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ZYG11BQ9C0D3 744 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 SP110Q9HB58 689 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 VPS45Q9NRW7 570 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ADA2Q9NZK5 511 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ACOT8O14734 319 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 RHOQP17081 205 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 GPR15P49685 360 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 TBX4P57082 545 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 IHHQ14623 411 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ACAP2Q15057 778 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 TLR1Q15399 786 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 PSMD5Q16401 504 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 DDR2Q16832 855 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ALFQ53S48 1182 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ARMC3Q5W041 872 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ZNF683Q8IZ20 524 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 ARHGAP18Q8N392 663 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 FAM156AQ8NDB6 213 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 SPC25Q9HBM1 224 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 TRPC7Q9HCX4 862 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 PRDM5Q9NQX1 630 aaPredicted RBP23.51■■□□□ 1.35
NDEL1-201ENST00000334527 SCML2Q9UQR0 700 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 VWA7Q9Y334 891 aa23.51■■□□□ 1.35
NDEL1-201ENST00000334527 PAPSS2O95340 614 aaPredicted RBP23.5■■□□□ 1.35
NDEL1-201ENST00000334527 SLC2A3P11169 496 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 SLC14A2Q15849 920 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 PPP1R3AQ16821 1122 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 MS4A13Q5J8X5 152 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 TMEM126BQ8IUX1 230 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 LILRA2Q8N149 483 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 PSMG2Q969U7 264 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 KLHL32Q96NJ5 620 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 CEP350Q5VT06 3117 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 TRIM38O00635 465 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 RPLP2P05387 115 aaKnown RBP23.5■■□□□ 1.35
NDEL1-201ENST00000334527 CYBAP13498 195 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 CDKN2DP55273 166 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 SQLEQ14534 574 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 SPATA24Q86W54 205 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 PCDH20Q8N6Y1 951 aaKnown RBP23.5■■□□□ 1.35
NDEL1-201ENST00000334527 HMGCLL1Q8TB92 370 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 PIP4K2CQ8TBX8 421 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 HDAC10Q969S8 669 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 UTP6Q9NYH9 597 aaKnown RBP23.5■■□□□ 1.35
NDEL1-201ENST00000334527 TBC1D30Q9Y2I9 924 aa23.5■■□□□ 1.35
NDEL1-201ENST00000334527 C15orf38-AP3S2A0A0A6YYH1 394 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 UBDO15205 165 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 SLC7A4O43246 635 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 B4GALT3O60512 393 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 ARSDP51689 593 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PSME3P61289 254 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PRAMEP78395 509 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 ROR2Q01974 943 aaKnown RBP23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PDAP1Q13442 181 aaKnown RBP23.49■■□□□ 1.35
NDEL1-201ENST00000334527 SIRPB2Q5JXA9 342 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 CST9Q5W186 159 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 MSANTD2Q6P1R3 559 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 ARPINQ7Z6K5 226 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 SLC22A9Q8IVM8 553 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 NUP93Q8N1F7 819 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.351e-7■■■■■ 30.3
NDEL1-201ENST00000334527 SPATA16Q9BXB7 569 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 ALG9Q9H6U8 611 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 TMEM248Q9NWD8 314 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PCDHGA7Q9Y5G6 932 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 MROH6A6NGR9 719 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 OR51F1A6NGY5 319 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 GRIA2P42262 883 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 STX5Q13190 355 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 FASTKQ14296 549 aaKnown RBP23.49■■□□□ 1.35
NDEL1-201ENST00000334527 GPR158Q5T848 1215 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 FATE1Q969F0 183 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PKP2Q99959 881 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 MFSD1Q9H3U5 465 aa23.49■■□□□ 1.35
NDEL1-201ENST00000334527 MARCH4Q9P2E8 410 aaPredicted RBP23.49■■□□□ 1.35
NDEL1-201ENST00000334527 UXTQ9UBK9 157 aaPredicted RBP23.49■■□□□ 1.35
NDEL1-201ENST00000334527 PRSS51A0A1B0GVH4 220 aa23.48■■□□□ 1.35
NDEL1-201ENST00000334527 PSMD12O00232 456 aaPredicted RBP23.48■■□□□ 1.35
NDEL1-201ENST00000334527 DENRO43583 198 aaKnown RBP23.48■■□□□ 1.35
NDEL1-201ENST00000334527 CTGFP29279 349 aa23.48■■□□□ 1.35
NDEL1-201ENST00000334527 ZNF157P51786 506 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms