RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 AQP4P55087 323 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ADIGQ0VDE8 80 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 FSTL1Q12841 308 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 AP5B1Q2VPB7 878 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ARHGAP15Q53QZ3 475 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ECHDC2Q86YB7 292 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MINDY2Q8NBR6 621 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 OR2T34Q8NGX1 318 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 OR2T3Q8NH03 318 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 FCRL4Q96PJ5 515 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 DENND2DQ9H6A0 471 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 FBXO9Q9UK97 447 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CNTNAP2Q9UHC6 1331 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PLK4O00444 970 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ZBTB14O43829 449 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CCNDBP1O95273 360 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ARP10275 920 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 IGFBP5P24593 272 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PEX2P28328 305 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 TUBP50607 506 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RGS1Q08116 209 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 TCEA2Q15560 299 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PCID2Q5JVF3 399 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CLNKQ7Z7G1 428 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PSTKQ8IV42 348 aaKnown RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 LPAR1Q92633 364 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 SLC6A15Q9H2J7 730 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MAGEE1Q9HCI5 957 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PDP1Q9P0J1 537 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 STOX2Q9P2F5 926 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ATP6AP2A0A1C7CYW4 349 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 AIREO43918 545 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ATP6AP2O75787 350 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MLYCDO95822 493 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ITIH1P19827 911 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 C1orf189Q5VU69 101 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RNF38Q9H0F5 515 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CHD1O14646 1710 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 IRGMA1A4Y4 181 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ORC5O43913 435 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PRKD3O94806 890 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RPL22P35268 128 aaKnown RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RENBPP51606 427 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MXD1Q05195 221 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 HLA-DQA1Q5Y7H0 255 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 APTXQ7Z2E3 356 aaKnown RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 GPR65Q8IYL9 337 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 DSELQ8IZU8 1212 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 UCMAQ8WVF2 138 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ITCHQ96J02 903 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 KDM6AO15550 1401 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SUV39H1O43463 412 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 GRIN3BO60391 1043 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 LRG1P02750 347 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 IFNA6P05013 189 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TSHRP16473 764 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TFEBP19484 476 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 DGKAP23743 735 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MNDAP41218 407 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 NDST1P52848 882 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MPP2Q14168 576 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 HMBOX1Q6NT76 420 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TNFAIP8L1Q8WVP5 186 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 LRTOMTQ8WZ04 291 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 BTBD9Q96Q07 612 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MRPL57Q9BQC6 102 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MAT2BQ9NZL9 334 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 NARFQ9UHQ1 456 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 H3BM21 787 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 AVILO75366 819 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CCNYL3P0C7X3 344 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 BMP7P18075 431 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 STXBP5Q5T5C0 1151 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 AFTPHQ6ULP2 937 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TMPRSS11AQ6ZMR5 421 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MSANTD1Q6ZTZ1 278 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 AHSA2Q719I0 299 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PHC2Q8IXK0 858 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RDH11Q8TC12 318 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RBM4BQ9BQ04 359 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RBM4Q9BWF3 364 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 NMUR2Q9GZQ4 415 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 IL22Q9GZX6 179 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SMPD3Q9NY59 655 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 LRRC14BA6NHZ5 514 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RAMP2O60895 175 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 NR2F1P10589 423 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PTPN3P26045 913 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SOX10P56693 466 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RAB10P61026 200 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms