RNA–Protein interactions for RNA: ENST00000333843.8

MBD3L3-201, Transcript of methyl-CpG binding domain protein 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3L3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3-201ENST00000333843 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 EID2Q8N6I1 236 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 BTN2A2Q8WVV5 523 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 EVA1BQ9NVM1 165 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 KCTD5Q9NXV2 234 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 NLGN3Q9NZ94 848 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
MBD3L3-201ENST00000333843 TMEM110-MUSTN1A8MSY1 372 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 C1QTNF9BB2RNN3 333 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 HTRA2O43464 458 aaPredicted RBP13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 CACNA1GO43497 2377 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 MFSD11O43934 449 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 MMP20O60882 483 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 C6P13671 934 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 CKMT2P17540 419 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 MX2P20592 715 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 ACP1P24666 158 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 MMP13P45452 471 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 THOP1P52888 689 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 PDE1CQ14123 709 aaPredicted RBP13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 LRRC73Q5JTD7 316 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 MARC1Q5VT66 337 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 LRRC38Q5VT99 294 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 DPPA4Q7L190 304 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 TMPRSS12Q86WS5 348 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 ZSWIM9Q86XI8 627 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 PNPLA1Q8N8W4 532 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 NETO2Q8NC67 525 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 PCDH19Q8TAB3 1148 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 CHP1Q99653 195 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 WRAP53Q9BUR4 548 aaKnown RBP13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 DMXL2Q8TDJ6 3036 aa13.77□□□□□ -0.21
MBD3L3-201ENST00000333843 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SCAMP1O15126 338 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SDC3O75056 442 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 CD48P09326 243 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 CES1P23141 567 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 HNF1BP35680 557 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SLC1A1P43005 524 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SCNN1BP51168 640 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 HADHBP55084 474 aaKnown RBP13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 TAS2R40P59535 323 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 RALGDSQ12967 914 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 MTM1Q13496 603 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 LRRC14Q15048 493 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 IRF4Q15306 451 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 IFI16Q16666 785 aaKnown RBP13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SLC25A45Q8N413 288 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 FAM181AQ8N9Y4 354 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 ZNF548Q8NEK5 533 aaPredicted RBP13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SLC35G2Q8TBE7 412 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 MAML1Q92585 1016 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 TRIM5Q9C035 493 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 POLR1EQ9GZS1 481 aaKnown RBP13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 SPTLC3Q9NUV7 552 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
MBD3L3-201ENST00000333843 PKD1L2Q7Z442 2459 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 PSMD11O00231 422 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 TPP1O14773 563 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 LCA5LO95447 670 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 CPP00450 1065 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 ELFN1P0C7U0 828 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 GIMD1P0DJR0 217 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 CCNCP24863 283 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 GJC1P36383 396 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 LIG3P49916 1009 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 BLKP51451 505 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 ZCCHC8Q6NZY4 707 aaKnown RBP13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 TC2NQ8N9U0 490 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 ZCCHC14Q8WYQ9 949 aaKnown RBP13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 MRFAP1L1Q96HT8 127 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 ZNF830Q96NB3 372 aaPredicted RBP13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 UCKL1Q9NWZ5 548 aa13.75□□□□□ -0.21
MBD3L3-201ENST00000333843 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 LRP4O75096 1905 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 PLXNB3Q9ULL4 1909 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 TRIM38O00635 465 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 MATN3O15232 486 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 AQP9O43315 295 aa13.74□□□□□ -0.21
MBD3L3-201ENST00000333843 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms