RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SHKBP1Q8TBC3 707 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 ARRDC2Q8TBH0 407 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 GDPD5Q8WTR4 605 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 HMCESQ96FZ2 354 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 DUS3LQ96G46 650 aaKnown RBP10.81□□□□□ -0.68
CCDC172-201ENST00000333254 CEP295NLQ96MC4 621 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 WDR41Q9HAD4 459 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 SP110Q9HB58 689 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 MPP6Q9NZW5 540 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 SUCOQ9UBS9 1254 aaKnown RBP10.81□□□□□ -0.68
CCDC172-201ENST00000333254 CNOT11Q9UKZ1 510 aaKnown RBP10.81□□□□□ -0.68
CCDC172-201ENST00000333254 INPP5FQ9Y2H2 1132 aa10.81□□□□□ -0.68
CCDC172-201ENST00000333254 PRSS51A0A1B0GVH4 220 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 TRIM38O00635 465 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 AIM2O14862 343 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 DENRO43583 198 aaKnown RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 S1PR4O95977 384 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 F7P08709 466 aaPredicted RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 ATXN1LP0C7T5 689 aaKnown RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 IMPDH1P20839 514 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SAT1P21673 171 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 YY1P25490 414 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 CHRNA4P43681 627 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 HSPA13P48723 471 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 PGFP49763 221 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 THOP1P52888 689 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 CRHR2Q13324 411 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 ADGRE1Q14246 886 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 FLOT2Q14254 428 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 GPR162Q16538 588 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SFT2D3Q587I9 215 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 NOMO2Q5JPE7 1267 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 TCHHL1Q5QJ38 904 aaPredicted RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 RARS2Q5T160 578 aaKnown RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 RBM20Q5T481 1227 aaKnown RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 MFN1Q8IWA4 741 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SCN4BQ8IWT1 228 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 MARVELD2Q8N4S9 558 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 ZFAND2BQ8WV99 257 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 CCDC124Q96CT7 223 aaKnown RBP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 RCN3Q96D15 328 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SPATA17Q96L03 361 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 CATSPER2Q96P56 530 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 CYP2S1Q96SQ9 504 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 OLFM1Q99784 485 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 SHCBP1LQ9BZQ2 653 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 EPB41L1Q9H4G0 881 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 NT5MQ9NPB1 228 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCDC172-201ENST00000333254 RAB26Q9ULW5 256 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 VWA7Q9Y334 891 aa10.8□□□□□ -0.68
CCDC172-201ENST00000333254 NEMP1O14524 444 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CA12O43570 354 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 LDB2O43679 373 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ZMPSTE24O75844 475 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 MOCS2O96007 188 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 JUNP05412 331 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 FDXRP22570 491 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 PEX2P28328 305 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CD86P42081 329 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CCR10P46092 362 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 USP46P62068 366 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SLC10A7Q0GE19 358 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TRAP1Q12931 704 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ART3Q13508 389 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SERINC3Q13530 473 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CSHL1Q14406 222 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ZNF460Q14592 562 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TRIP10Q15642 601 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 KCNA10Q16322 511 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CCNYL1Q8N7R7 359 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 RHEBL1Q8TAI7 183 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 HASPINQ8TF76 798 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 C2orf15Q8WU43 125 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CDRT15Q96T59 188 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 GSTO2Q9H4Y5 243 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 Q9H521 79 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TLR8Q9NR97 1041 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 RIMS3Q9UJD0 308 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CCDC78A2IDD5 438 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ACOT8O14734 319 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 PRAMEF11O60813 436 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 RAMP2O60895 175 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 C8BP07358 591 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 FGF4P08620 206 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ZDHHC11BP0C7U3 371 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CCDC166P0CW27 439 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 VCLP18206 1134 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 YWHAQP27348 245 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 TM4SF4P48230 202 aa10.79□□□□□ -0.68
CCDC172-201ENST00000333254 MRPL19P49406 292 aaKnown RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 SH3BGRP55822 239 aaPredicted RBP10.79□□□□□ -0.68
CCDC172-201ENST00000333254 CEACAM7Q14002 265 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms