RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 NAA50Q9GZZ1 169 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 NANOGQ9H9S0 305 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CHRAC1Q9NRG0 131 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 DPP3Q9NY33 737 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SMPD3Q9NY59 655 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CCDC167Q9P0B6 97 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SEPT10Q9P0V9 454 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 KLHL8Q9P2G9 620 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 VWA7Q9Y334 891 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 NME4O00746 187 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 CNOT3O75175 753 aaKnown RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 USP12O75317 370 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 BCL10O95999 233 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 AHSGP02765 367 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 ZNF182P17025 639 aaPredicted RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 JAK1P23458 1154 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 EDNRBP24530 442 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 FOXM1Q08050 763 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 BST2Q10589 180 aaKnown RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 LARP4Q71RC2 724 aaKnown RBP eCLIP11.34□□□□□ -0.59
GINS3-202ENST00000328514 PLPPR4Q7Z2D5 763 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 FUNDC1Q8IVP5 155 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 CMTR2Q8IYT2 770 aaKnown RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 LRRC71Q8N4P6 559 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 CLEC4CQ8WTT0 213 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 NXNL1Q96CM4 212 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 HSFY1Q96LI6 401 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 VAT1Q99536 393 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 TRMOQ9BU70 441 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 EIF2AQ9BY44 585 aaKnown RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 FAM49BQ9NUQ9 324 aa11.34□□□□□ -0.59
GINS3-202ENST00000328514 SCHIP1Q9P0W5 487 aaPredicted RBP11.34□□□□□ -0.59
GINS3-202ENST00000328514 RNF103-CHMP3A0A140T963 221 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 GPC4O75487 556 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 STMN1P16949 149 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 HDCP19113 662 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 MAP4P27816 1152 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 NMBRP28336 390 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CD68P34810 354 aaPredicted RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 NOS2P35228 1153 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 GRM5P41594 1212 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 ARCN1P48444 511 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 BCAT1P54687 386 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CDH17Q12864 832 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 AMHR2Q16671 573 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CYHR1Q6ZMK1 362 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CDR2LQ86X02 465 aaPredicted RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 ZC3H7AQ8IWR0 971 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 FBXL20Q96IG2 436 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 HEPHQ9BQS7 1158 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 ARMC7Q9H6L4 198 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 SFMBT1Q9UHJ3 866 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 OAZ3Q9UMX2 235 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 NDUFAF1Q9Y375 327 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 NME7Q9Y5B8 376 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CPQQ9Y646 472 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 A0A0G2JMZ2 1700 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 CCDC78A2IDD5 438 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 J3QRK9 145 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 KCNK1O00180 336 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 AQP9O43315 295 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 UMPSP11172 480 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 MATN1P21941 496 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 GPX3P22352 226 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 RFC2P35250 354 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 RPS9P46781 194 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 HCAR3P49019 387 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 AIF1P55008 147 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 GJA9P57773 515 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 TRAF2Q12933 501 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CYP2A13Q16696 494 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 OTUD1Q5VV17 481 aaPredicted RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 LINC00523Q86TU6 105 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CUZD1Q86UP6 607 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 IGFN1Q86VF2 1251 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 FAM131BQ86XD5 332 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 PTRH1Q86Y79 214 aaKnown RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 SLC41A1Q8IVJ1 513 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CEP97Q8IW35 865 aa11.33□□□□□ -0.6
GINS3-202ENST00000328514 CCDC117Q8IWD4 279 aaPredicted RBP11.33□□□□□ -0.6
GINS3-202ENST00000328514 MFSD6LQ8IWD5 586 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms