RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 FEM1CQ96JP0 617 aa21.55■■□□□ 1.04
LIMS2-201ENST00000324938 SEMA3CQ99985 751 aa21.55■■□□□ 1.04
LIMS2-201ENST00000324938 AOC2O75106 756 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 THRAP10827 490 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 PPARGP37231 505 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-201ENST00000324938 EPHB1P54762 984 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 PRAMEP78395 509 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 ACVR1Q04771 509 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 DUSP4Q13115 394 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 C5orf22Q49AR2 442 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 KLC3Q6P597 504 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 TRIM67Q6ZTA4 783 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 PEX13Q92968 403 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 HDAC10Q969S8 669 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 SGF29Q96ES7 293 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 UBXN10Q96LJ8 280 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 PPP1R36Q96LQ0 422 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 PDFQ9HBH1 243 aa21.54■■□□□ 1.04
LIMS2-201ENST00000324938 WISP3O95389 354 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-201ENST00000324938 FGF1P05230 155 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 JUNP05412 331 aaKnown RBP21.53■■□□□ 1.04
LIMS2-201ENST00000324938 HLA-DPA1P20036 260 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 TBL3Q12788 808 aaKnown RBP21.53■■□□□ 1.04
LIMS2-201ENST00000324938 BTG3Q14201 252 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-201ENST00000324938 ZNF235Q14590 738 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 SETD3Q86TU7 594 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-201ENST00000324938 KIRREL3Q8IZU9 778 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 OR6P1Q8NGX9 317 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 ZNF599Q96NL3 588 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 TTLL2Q9BWV7 592 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 NDE1Q9NXR1 346 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 RGSL1A5PLK6 1076 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 SLC38A8A6NNN8 435 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 F5H5T6 163 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 MUSKO15146 869 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 MAP3K7O43318 606 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 PDE5AO76074 875 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 S1PR4O95977 384 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 RBP1P09455 135 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 ANKS3Q6ZW76 656 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 ADGRG6Q86SQ4 1221 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 GIPC2Q8TF65 315 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 JADE3Q92613 823 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 LRFN2Q9ULH4 789 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 PPM1HQ9ULR3 514 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 LRCH1Q9Y2L9 728 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 VWA7Q9Y334 891 aa21.53■■□□□ 1.04
LIMS2-201ENST00000324938 NEMP2A6NFY4 417 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 INHAP05111 366 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 CCDC166P0CW27 439 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 ATF6P18850 670 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 ILF2Q12905 390 aaKnown RBP21.52■■□□□ 1.04
LIMS2-201ENST00000324938 LAMB3Q13751 1172 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 PDCD2Q16342 344 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-201ENST00000324938 ALG1LQ6GMV1 187 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 ANO7Q6IWH7 933 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 LGI2Q8N0V4 545 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 FBXW8Q8N3Y1 598 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 RP9Q8TA86 221 aaKnown RBP21.52■■□□□ 1.04
LIMS2-201ENST00000324938 GBF1Q92538 1859 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 IFT43Q96FT9 208 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 MAELQ96JY0 434 aaKnown RBP21.52■■□□□ 1.04
LIMS2-201ENST00000324938 TMEM175Q9BSA9 504 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 S100A14Q9HCY8 104 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 MARCH4Q9P2E8 410 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-201ENST00000324938 PHF24Q9UPV7 400 aa21.52■■□□□ 1.04
LIMS2-201ENST00000324938 TRPC5OSA6NMA1 111 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 A8MT66 165 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 CCL22O00626 93 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 GJB3O75712 270 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 EPOP01588 193 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 CDC25CP30307 473 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 SLC26A3P40879 764 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 ERFP50548 548 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 KCNQ1P51787 676 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 MTTPP55157 894 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 BFSP2Q13515 415 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 CCNIQ14094 377 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 HERC3Q15034 1050 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 ACAP2Q15057 778 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 SH2D4BQ5SQS7 431 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 SNX32Q86XE0 403 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 NPAS4Q8IUM7 802 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 CDK5RAP1Q96SZ6 601 aaKnown RBP21.52■■□□□ 1.03
LIMS2-201ENST00000324938 TTPALQ9BTX7 342 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 POMPQ9Y244 141 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 KCTD3Q9Y597 815 aa21.52■■□□□ 1.03
LIMS2-201ENST00000324938 SCN5AQ14524 2016 aa21.51■■□□□ 1.03
LIMS2-201ENST00000324938 NT5C1B-RDH14C9J2C7 533 aa21.51■■□□□ 1.03
LIMS2-201ENST00000324938 IPO13O94829 963 aaKnown RBP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 GALTP07902 379 aa21.51■■□□□ 1.03
LIMS2-201ENST00000324938 TMEM173Q86WV6 379 aaPredicted RBP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 RNF135Q8IUD6 432 aa21.51■■□□□ 1.03
LIMS2-201ENST00000324938 FAM136AQ96C01 138 aa21.51■■□□□ 1.03
LIMS2-201ENST00000324938 ZNF184Q99676 751 aaPredicted RBP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 MRPL9Q9BYD2 267 aaKnown RBP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 GEMIN8Q9NWZ8 242 aaKnown RBP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.51■■□□□ 1.03
LIMS2-201ENST00000324938 OR51F1A6NGY5 319 aa21.5■■□□□ 1.03
LIMS2-201ENST00000324938 TMEM233B4DJY2 109 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms