RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 GJB3O75712 270 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 TCEA3O75764 348 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SHBGP04278 402 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SRCP12931 536 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 GNAZP19086 355 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MGAT1P26572 445 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 PEX19P40855 299 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 EIF2DP41214 584 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 CTSOP43234 321 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MAGEA8P43361 318 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 ECT2LQ008S8 904 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 NR1H3Q13133 447 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 CUL3Q13618 768 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 GEN1Q17RS7 908 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 WASHC2DQ5SRD0 308 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 STEAP4Q687X5 459 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MBLAC2Q68D91 279 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 IRGCQ6NXR0 463 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 CYS1Q717R9 158 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 PALM2Q8IXS6 379 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 RBM12BQ8IXT5 1001 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MPP5Q8N3R9 675 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 DNAAF3Q8N9W5 541 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 NSMCE3Q96MG7 304 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 TRIB3Q96RU7 358 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 CDX2Q99626 313 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 TRMT61BQ9BVS5 477 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 IL22Q9GZX6 179 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 PLAC1Q9HBJ0 212 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SYBUQ9NX95 663 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 ZC3H7BQ9UGR2 993 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 SLC25A13Q9UJS0 675 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
DDX39A-202ENST00000324340 MAGEB16A2A368 324 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ENO4A6NNW6 628 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 H3BQ06 376 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 TRIM24O15164 1050 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 MBTPS2O43462 519 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SMAD6O43541 496 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SMIM24O75264 130 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ASLP04424 464 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ATXN1LP0C7T5 689 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 IMPDH2P12268 514 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 CHN1P15882 459 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 PGAM1P18669 254 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 CALB2P22676 271 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ATP5DP30049 168 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SSTR1P30872 391 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 PHBP35232 272 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SCNN1BP51168 640 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SESN2P58004 480 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 RHOAP61586 193 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 AP1S1P61966 158 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 MXRA7P84157 204 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 CDK18Q07002 472 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 GRM2Q14416 872 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 STAT4Q14765 748 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ZRSR2Q15696 482 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 SLC1A5Q15758 541 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 C3orf62Q6ZUJ4 267 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 OR2W6PQ8NHA6 318 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 FAM81AQ8TBF8 368 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 APOL2Q9BQE5 337 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 TDRD1Q9BXT4 1180 aaKnown RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 YIPF3Q9GZM5 350 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 FETUBQ9UGM5 382 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 ERVW-1Q9UQF0 538 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 MUC22E2RYF6 1773 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-202ENST00000324340 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
DDX39A-202ENST00000324340 COL4A2P08572 1712 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 ATP9BO43861 1147 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 COQ9O75208 318 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 GSRP00390 522 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 POLR2EP19388 210 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms