RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PPP1R36Q96LQ0 422 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 MYRFLQ96LU7 910 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZNF558Q96NG5 402 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 GPR78Q96P69 363 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CINPQ9BW66 212 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 ILKAPQ9H0C8 392 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 DENND2DQ9H6A0 471 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 MARCH4Q9P2E8 410 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 SCN5AQ14524 2016 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TARM1B6A8C7 271 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 DLX3O60479 287 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 RHOCP08134 193 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 SPATA31D3P0C874 917 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 HLA-DPA1P20036 260 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 CCND1P24385 295 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 RGRP47804 291 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 PLXNA3P51805 1871 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 DSG1Q02413 1049 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TPGS2Q68CL5 300 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 SPATA31D4Q6ZUB0 917 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 LCA5Q86VQ0 697 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 CCNYL1Q8N7R7 359 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 RBM15BQ8NDT2 890 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 OR13C4Q8NGS5 318 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 BHMTQ93088 406 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 PLD4Q96BZ4 506 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 RMDN1Q96DB5 314 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 FEM1CQ96JP0 617 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 DNAJC1Q96KC8 554 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 ZNF599Q96NL3 588 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 PSKH2Q96QS6 385 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 CDH19Q9H159 772 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 MUC3BQ9H195 1237 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 FAM96AQ9H5X1 160 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 STN1Q9H668 368 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 GPAMQ9HCL2 828 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TRPC7Q9HCX4 862 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 DNAJC28Q9NX36 388 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 UBA2Q9UBT2 640 aaPredicted RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 SEPT3Q9UH03 358 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TAGLN3Q9UI15 199 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TBX21Q9UL17 535 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 A0A1B0GVM2 712 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TCAF2A6NFQ2 919 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TMEM114B3SHH9 223 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 PIGNO95427 931 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 C1RP00736 705 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 EPOP01588 193 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 FGF1P05230 155 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 ATP5BP06576 529 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 CCDC166P0CW27 439 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 MPSTP25325 297 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 CA8P35219 290 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 FAM83EQ2M2I3 478 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 HECTD2Q5U5R9 776 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TMC7Q7Z402 723 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 UBE2Q1Q7Z7E8 422 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 SLC39A11Q8N1S5 342 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 TTC8Q8TAM2 541 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 MAPK15Q8TD08 544 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 BRSK1Q8TDC3 778 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 SLC22A12Q96S37 553 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 MGME1Q9BQP7 344 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 DRC3Q9H069 523 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 MRPL46Q9H2W6 279 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 VWA7Q9Y334 891 aa7.61□□□□□ -1.19
IFT88-201ENST00000319980 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.61□□□□□ -1.19
IFT88-201ENST00000319980 A0A087X1B8 175 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 GOLGA8QA0A0J9YX86 632 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ILVBLA1L0T0 632 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 GOLGA8OA6NCC3 632 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NEMP2A6NFY4 417 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 E9PBE3 544 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SPECC1L-ADORA2AF8WAN1 911 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 GOLGA8NF8WBI6 632 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 KDELR3O43731 214 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 KLHL41O60662 606 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 H2AFYO75367 372 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 GLP2RO95838 553 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 S1PR4O95977 384 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 GOT2P00505 430 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 SLC4A1P02730 911 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 URODP06132 367 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MBL2P11226 248 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 CSF2RAP15509 400 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ALOX15P16050 662 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 TFEBP19484 476 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PGM1P36871 562 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CLCN5P51795 746 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SMAD3P84022 425 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 MXRA7P84157 204 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TSNAXIP1Q2TAA8 658 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SLC9B1Q4ZJI4 515 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PRPF38BQ5VTL8 546 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 RNF219Q5W0B1 726 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 LINGO4Q6UY18 593 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TMPRSS6Q8IU80 811 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 POU5F2Q8N7G0 328 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 FAM136AQ96C01 138 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NSMCE3Q96MG7 304 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms