RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ELK3P41970 407 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 MAGEA6P43360 314 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 MAPK8P45983 427 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 COPAP53621 1224 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 MRPS21P82921 87 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 TMPRSS15P98073 1019 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 FZD5Q13467 585 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 LRRC8BQ6P9F7 803 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 KIAA1324Q6UXG2 1013 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CENPUQ71F23 418 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PARS2Q7L3T8 475 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 LINC00523Q86TU6 105 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 TTC7BQ86TV6 843 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 FAM124AQ86V42 546 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 TMPRSS6Q8IU80 811 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PGBD3Q8N328 593 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 FBXO36Q8NEA4 188 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PJA1Q8NG27 643 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 FEM1CQ96JP0 617 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 GABRG3Q99928 467 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ADGRE3Q9BY15 652 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CASS4Q9NQ75 786 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PPM1HQ9ULR3 514 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 SPO11Q9Y5K1 396 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CXorf51AA0A1B0GTR3 108 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 A0A1W2PP55 124 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 C16orf96A6NNT2 1141 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PI15O43692 258 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 NDST3O95803 873 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 PRNPP04156 253 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CA4P22748 312 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 XPAP23025 273 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CES1P23141 567 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CSNK1DP48730 415 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CAV1Q03135 178 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ENPP2Q13822 863 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 QPCTQ16769 361 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ANO7Q6IWH7 933 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 TRMT11Q7Z4G4 463 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 TSPAN33Q86UF1 283 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ZNF687Q8N1G0 1237 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 KDM1BQ8NB78 822 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 ARRDC3Q96B67 414 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CPEB1Q9BZB8 566 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 BPIFA1Q9NP55 256 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 DYRK4Q9NR20 520 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 CHRAC1Q9NRG0 131 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 SIT1Q9Y3P8 196 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 KCTD3Q9Y597 815 aa15.49■□□□□ 0.07
PDLIM5-202ENST00000318007 FAM47DPA6NHR8 397 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 FZD6O60353 706 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 SOCS5O75159 536 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 RNASEH2AO75792 299 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 ACSL3O95573 720 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 CAMK2GQ13555 558 aaPredicted RBP15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 LRRC32Q14392 662 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 CST6Q15828 149 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 CRY1Q16526 586 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 ZNF805Q5CZA5 627 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 FBXO38Q6PIJ6 1188 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 PIH1D2Q8WWB5 315 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 PPP1R2P1Q96PQ5 205 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 TUBGCP5Q96RT8 1024 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 XAB2Q9HCS7 855 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 BCCIPQ9P287 314 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 RAB21Q9UL25 225 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 MMP17Q9ULZ9 603 aa15.48■□□□□ 0.07
PDLIM5-202ENST00000318007 NPIPB15A6NHN6 443 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 PSMD3O43242 534 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 HTRA2O43464 458 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 RNASEH1O60930 286 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 F7P08709 466 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 NDUFV2P19404 249 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 HLA-DPA1P20036 260 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 HNF1BP35680 557 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 CDK16Q00536 496 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 UGP2Q16851 508 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 EOGTQ5NDL2 527 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 FBXL19Q6PCT2 694 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 GLT6D1Q7Z4J2 308 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 AADATQ8N5Z0 425 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 MCUQ8NE86 351 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 MDGA1Q8NFP4 955 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 WRAP53Q9BUR4 548 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 SEMA4AQ9H3S1 761 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 BFARQ9NZS9 450 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 SAMD15Q9P1V8 674 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 LAMA1P25391 3075 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 FRYLO94915 3013 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 CKAP5Q14008 2032 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 C1orf232A0A0U1RR37 186 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 GOLGA8KD6RF30 607 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 C1QTNF3-AMACRE9PGA6 284 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 GOLGA8TH3BQL2 631 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 DCXO43602 365 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 FGF1P05230 155 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 MCM3P25205 808 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 TNFRSF8P28908 595 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms