RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MED1Q15648 1581 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ABCC6O95255 1503 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 SPATA31A5Q5VU36 1347 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 SPATA31A6Q5VVP1 1343 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 SPATA31A7Q8IWB4 1347 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 PXDNQ92626 1479 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 LRRC37A3O60309 1634 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 A0A1W2PQ09 198 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 KCNJ18B7U540 433 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ORC4O43929 436 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 BEST1O76090 585 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 OR2C1O95371 312 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 EIF2S1P05198 315 aaKnown RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CLTBP09497 229 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 MAKP20794 623 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 POU1F1P28069 291 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 RARRES1P49788 294 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CYP4A11Q02928 519 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CHAF1BQ13112 559 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 C5orf22Q49AR2 442 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 GLE1Q53GS7 698 aaKnown RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 GKAP1Q5VSY0 366 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TBC1D9BQ66K14 1250 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 HIST2H2BCQ6DN03 193 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 HIST2H2BDQ6DRA6 164 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TOM1L2Q6ZVM7 507 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 NELL1Q92832 810 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF764Q96H86 408 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ASB2Q96Q27 587 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 KLK15Q9H2R5 256 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 NFKBIL1Q9UBC1 381 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CBY3A6NI87 242 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 TARM1B6A8C7 271 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 MSI1O43347 362 aaKnown RBP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 SLC25A17O43808 307 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 HNRNPCL1O60812 293 aaKnown RBP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 PAGE4O60829 102 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 SERPINC1P01008 464 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 CYP2J2P51589 502 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 ARSFP54793 590 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 GALNT3Q14435 633 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 TMEM119Q4V9L6 283 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 C10orf76Q5T2E6 689 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 LRRC8EQ6NSJ5 796 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 AADACL2Q6P093 401 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 FBXO42Q6P3S6 717 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 CRELD2Q6UXH1 353 aaPredicted RBP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 IL20RBQ6UXL0 311 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 PRSS45Q7RTY3 260 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 CCDC25Q86WR0 208 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 DHX40Q8IX18 779 aaKnown RBP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 TTC5Q8N0Z6 440 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 ZKSCAN4Q969J2 545 aaPredicted RBP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 CMTM3Q96MX0 182 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 YME1L1Q96TA2 773 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 MEIS3Q99687 375 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 EFHD1Q9BUP0 239 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMCO3-201ENST00000316048 ENTPD7Q9NQZ7 604 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 HYPKQ9NX55 129 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 SNX8Q9Y5X2 465 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 LMO7Q8WWI1 1683 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 RGPD2P0DJD1 1756 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 WDR17Q8IZU2 1322 aa4.23□□□□□ -1.73
SMCO3-201ENST00000316048 RGS12O14924 1447 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 FRMD3A2A2Y4 597 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 BTBD19C9JJ37 291 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 NFATC1O95644 943 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TUBBP07437 444 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CYP2A6P11509 494 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 KLRC2P26717 231 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 SKIV2L2P42285 1042 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PTH2RP49190 550 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CLDN2P57739 230 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CCDC96Q2M329 555 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 COL28A1Q2UY09 1125 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 EDRF1Q3B7T1 1238 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 SYTL3Q4VX76 610 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 KLHL35Q6PF15 583 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF790Q6PG37 636 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PNLDC1Q8NA58 520 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PSPC1Q8WXF1 523 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 P2RY11Q96G91 374 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 AP1M1Q9BXS5 423 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 HIPK3Q9H422 1215 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PLEKHB1Q9UF11 243 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 XIRP1Q702N8 1843 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CAMTA1Q9Y6Y1 1673 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 RGPD5Q99666 1765 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 DDTLA6NHG4 134 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TSPY2A6NKD2 308 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 JTBO76095 146 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PLAUP00749 431 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 IL1AP01583 271 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms