RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 SIX1Q15475 284 aaPredicted RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 KDELC2Q7Z4H8 507 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 RASGEF1CQ8N431 466 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 FEM1CQ96JP0 617 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 WRAP53Q9BUR4 548 aaKnown RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 TDRD1Q9BXT4 1180 aaKnown RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 USP29Q9HBJ7 922 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 SMARCAL1Q9NZC9 954 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 TSPAN6O43657 245 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 PMPCBO75439 489 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 MT-CYBP00156 380 aaPredicted RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 IGHV4-34P06331 123 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 RETP07949 1114 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 NFKBIAP25963 317 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 MPLP40238 635 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 TNNT3P45378 269 aaPredicted RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CCR5P51681 352 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 IHHQ14623 411 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CCDC6Q16204 474 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CCNG2Q16589 344 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 NEK5Q6P3R8 708 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ARHGEF18Q6ZSZ5 1173 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ASCL5Q7RTU5 278 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 PRPF39Q86UA1 669 aaKnown RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 TRIM69Q86WT6 500 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CXorf40AQ8TE69 158 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 KLK6Q92876 244 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 IFT43Q96FT9 208 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 SPATA13Q96N96 652 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 GBA3Q9H227 469 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 PCDH9Q9HC56 1237 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 A8MX80 341 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 CES2O00748 559 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 AREL1O15033 823 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 OPHN1O60890 802 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 IFNB1P01574 187 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 PDHA1P08559 390 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 CTPS1P17812 591 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 CASQ1P31415 396 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 GDF10P55107 478 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 RPS21P63220 83 aaKnown RBP17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 OASLQ15646 514 aaKnown RBP17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 SEL1L3Q68CR1 1132 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 KIAA1161Q6NSJ0 714 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 FBXO38Q6PIJ6 1188 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 HORMAD1Q86X24 394 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 SYT12Q8IV01 421 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 NDUFAF2Q8N183 169 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 LRRN4CLQ8ND94 238 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 LPCAT1Q8NF37 534 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 FAM122AQ96E09 287 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 CAPZA3Q96KX2 299 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 AP1M1Q9BXS5 423 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 HOMER3Q9NSC5 361 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 PHTF1Q9UMS5 762 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 PCDHGA5Q9Y5G8 931 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 SAR1BQ9Y6B6 198 aa17.6■□□□□ 0.41
SWSAP1-201ENST00000312423 SPINT1O43278 529 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 DPP6P42658 865 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 PRPSAP1Q14558 356 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 ERCC6LQ2NKX8 1250 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 SETMARQ53H47 684 aaPredicted RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 PAPD7Q5XG87 772 aaKnown RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 USP45Q70EL2 814 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 GSTA5Q7RTV2 222 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 ZCCHC9Q8N567 271 aaKnown RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 RUBCNQ92622 972 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 RMDN1Q96DB5 314 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 FCRL5Q96RD9 977 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 ADGRE3Q9BY15 652 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 PILRBQ9UKJ0 227 aa17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 TTC7AQ9ULT0 858 aaPredicted RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 TPX2Q9ULW0 747 aaKnown RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 ZFR2Q9UPR6 939 aaKnown RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 V9GYY5 206 aaPredicted RBP17.59■□□□□ 0.41
SWSAP1-201ENST00000312423 RALGAPA1Q6GYQ0 2036 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 C5orf60A6NFR6 353 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 IGLON5A6NGN9 336 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 SLC31A1O15431 190 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 GFRA3O60609 400 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 MMP20O60882 483 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 GNSP15586 552 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 PRLRP16471 622 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 CD27P26842 260 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 PSMB4P28070 264 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 STIP1P31948 543 aaKnown RBP17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 ACTN2P35609 894 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 MMP12P39900 470 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 SGCGQ13326 291 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 GALNT3Q14435 633 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 CCDC89Q8N998 374 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 ACTRT1Q8TDG2 376 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 DNASE2BQ8WZ79 361 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 MYOCQ99972 504 aa17.58■□□□□ 0.41
SWSAP1-201ENST00000312423 TMEM74BQ9NUR3 256 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 273.2 ms