RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
SPTBN2-201ENST00000309996 FKTNO75072 461 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 SEC24AO95486 1093 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PCCBP05166 539 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 USP17L7P0C7H9 530 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 HDCP19113 662 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 OC90Q02509 493 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 ZNF540Q8NDQ6 660 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 ATL1Q8WXF7 558 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 GTPBP2Q9BX10 602 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 ATXN2Q99700 1313 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CRB1P82279 1406 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 H3BRB1 525 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 TSPAN1O60635 241 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 TNK2Q07912 1038 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 BROXQ5VW32 411 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 VASH1Q7L8A9 365 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 DENND1CQ8IV53 801 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PPP1R13LQ8WUF5 828 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 NELL1Q92832 810 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 ZNF184Q99676 751 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 FDXACB1Q9BRP7 624 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 WASHC1A8K0Z3 465 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 WASH3PC4AMC7 463 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 SPIBQ01892 262 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 WASH2PQ6VEQ5 465 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 GCNT7Q6ZNI0 430 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 C3orf14Q9HBI5 128 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 SMURF1Q9HCE7 757 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CCL23P55773 120 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CBX2Q14781 532 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 IMP3Q9NV31 184 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PLIN3O60664 434 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 BDNFP23560 247 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CAPGP40121 348 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PER3P56645 1201 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 RAB39AQ14964 217 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 MYH6P13533 1939 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 CLEC3AO75596 197 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 VIPP01282 170 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PKNOX1P55347 436 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 SEC13P55735 322 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PTENP60484 403 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 POC5Q8NA72 575 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 PRICKLE1Q96MT3 831 aaPredicted RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
SPTBN2-201ENST00000309996 TPP1O14773 563 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 MNDAP41218 407 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 RFX4Q33E94 735 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 GPR156Q8NFN8 814 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 TKTL2Q9H0I9 626 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 PGK1P00558 417 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ELFN1P0C7U0 828 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 GRIA3P42263 894 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 GFOD2Q3B7J2 385 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 PHF19Q5T6S3 580 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 TBATAQ96M53 351 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 KLHL32Q96NJ5 620 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 PLEKHG4BQ96PX9 1271 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 TRMT13Q9NUP7 481 aaKnown RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 NKIRAS2Q9NYR9 191 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 PGRMC2O15173 223 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 AMPD1P23109 780 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ERVK-24P63145 666 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ATXN7L2Q5T6C5 722 aaPredicted RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ZCCHC23Q6ZST2 131 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ZNF75CPQ92670 426 aaPredicted RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 LENG9Q96B70 501 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 LMLNQ96KR4 655 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 IL22Q9GZX6 179 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 KCNQ2O43526 872 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 GNALP38405 381 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 SP3Q02447 781 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 XKR6Q5GH73 641 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 SLC41A1Q8IVJ1 513 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 PSMA8Q8TAA3 256 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 MARK4Q96L34 752 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ASB8Q9H765 288 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 AGO4Q9HCK5 861 aaKnown RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 ERCC2P18074 760 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 CTSOP43234 321 aaPredicted RBP12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 MC1RQ01726 317 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 GSDMCQ9BYG8 508 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
SPTBN2-201ENST00000309996 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms