RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MTO1Q9Y2Z2 717 aaKnown RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 KIF26AQ9ULI4 1882 aaPredicted RBP11.96□□□□□ -0.49
TRIM40-205ENST00000307859 CXorf51AA0A1B0GTR3 108 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 WDR91A4D1P6 747 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 BIRC5O15392 142 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 TOP3BO95985 862 aaKnown RBP11.96□□□□□ -0.5
TRIM40-205ENST00000307859 AHSGP02765 367 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 CA3P07451 260 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 GSTA1P08263 222 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 F7P08709 466 aaPredicted RBP11.96□□□□□ -0.5
TRIM40-205ENST00000307859 SLC1A2P43004 574 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 POLD2P49005 469 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 SCNN1BP51168 640 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 IFT88Q13099 833 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 GALNT3Q14435 633 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 GRM3Q14832 879 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 TEAD2Q15562 447 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 ARHGAP15Q53QZ3 475 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 RALGPS1Q5JS13 557 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 PRSS36Q5K4E3 855 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 NEPROQ6NW34 567 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 LINGO4Q6UY18 593 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 CMC1Q7Z7K0 106 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 GALNT7Q86SF2 657 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 CLEC14AQ86T13 490 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 DENND6AQ8IWF6 608 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 FIBINQ8TAL6 211 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 RAB3IL1Q8TBN0 382 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 CALML6Q8TD86 181 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 SH3RF2Q8TEC5 729 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 DDI1Q8WTU0 396 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 ATXN7L3BQ96GX2 97 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 EXOC2Q96KP1 924 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 MFSD1Q9H3U5 465 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 ZDHHC7Q9NXF8 308 aa11.96□□□□□ -0.5
TRIM40-205ENST00000307859 EPOPA6NHQ4 379 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PLIN3O60664 434 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 XYLBO75191 536 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 GSRP00390 522 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PRLP01236 227 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PRKCGP05129 697 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 BPGMP07738 259 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 BGNP21810 368 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PSMA3P25788 255 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ABCG1P45844 678 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PLK1P53350 603 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ERVK-21P61565 698 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 MPP1Q00013 466 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 CTBP1Q13363 440 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 SLC5A9Q2M3M2 681 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PPM1JQ5JR12 505 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 N4BP2L1Q5TBK1 243 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF470Q6ECI4 717 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 APCDD1Q8J025 514 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 GABPB2Q8TAK5 448 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 BRSK1Q8TDC3 778 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ACDQ96AP0 544 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 LMLNQ96KR4 655 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PRRX2Q99811 253 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 PLCD4Q9BRC7 762 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 C2orf49Q9BVC5 232 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 SMG9Q9H0W8 520 aaKnown RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 KIAA1522Q9P206 1035 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ZMYM5Q9UJ78 669 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 FBXO5Q9UKT4 447 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 CCL26Q9Y258 94 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 ARL2BPQ9Y2Y0 163 aa11.95□□□□□ -0.5
TRIM40-205ENST00000307859 A0A096LPK6 155 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 PROCP04070 461 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CYBBP04839 570 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 C2P06681 752 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 TCF3P15923 654 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 AVPR1AP37288 418 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CD151P48509 253 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 ARSDP51689 593 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 PTPN5P54829 565 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 LMAN2Q12907 356 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 USP4Q13107 963 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 RETSATQ6NUM9 610 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 SRLQ86TD4 932 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 LCA5Q86VQ0 697 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 BLOC1S5Q8TDH9 187 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 STYXQ8WUJ0 223 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CCT6BQ92526 530 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 USP13Q92995 863 aaPredicted RBP11.94□□□□□ -0.5
TRIM40-205ENST00000307859 BHMTQ93088 406 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 MECRQ9BV79 373 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 TSSK1BQ9BXA7 367 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CAB39LQ9H9S4 337 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 TDP1Q9NUW8 608 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 TMEM216Q9P0N5 145 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms