RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 NDUFS2O75306 463 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 SERPINB7O75635 380 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 MCL1Q07820 350 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 BMT2Q1RMZ1 405 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 TMLHEQ9NVH6 421 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RAMP2O60895 175 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 CSN2P05814 226 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 OLR1P78380 273 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 TMEM68Q96MH6 324 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 GAL3ST1Q99999 423 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 ZFYVE28Q9HCC9 887 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 KNTC1P50748 2209 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 ANXA2P2A6NMY6 339 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 GHRP10912 638 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RPA3P35244 121 aaPredicted RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 NT5C2P49902 561 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 GDI2P50395 445 aaKnown RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 METTL21CQ5VZV1 264 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 UBE2E3Q969T4 207 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 EQTNQ9NQ60 294 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF69Q9UC07 566 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 MYH1P12882 1939 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 MYH2Q9UKX2 1941 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 MYH4Q9Y623 1939 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 SUV39H1O43463 412 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 CYP2B6P20813 491 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 CA9Q16790 459 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 RAB12Q6IQ22 244 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 ITIH5Q86UX2 942 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 SMG7Q92540 1137 aaKnown RBP13.46□□□□□ -0.26
TRIM56-201ENST00000306085 PARPBPQ9NWS1 579 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 CYB5AP00167 134 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 RPL5P46777 297 aaKnown RBP13.46□□□□□ -0.26
TRIM56-201ENST00000306085 PGDP52209 483 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 FKBP7Q9Y680 259 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 ARPC4-TTLL3A0A0A6YYG9 625 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 FBXO21O94952 628 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 CTSKP43235 329 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 S100A10P60903 97 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 RNPEPL1Q9HAU8 725 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 SAR1AQ9NR31 198 aa13.46□□□□□ -0.26
TRIM56-201ENST00000306085 HCN1O60741 890 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CCNE2O96020 404 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SCN1BQ07699 218 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 AKAP8O43823 692 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 TUBP50607 506 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 PRKCDQ05655 676 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 PREPLQ4J6C6 727 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 AADATQ8N5Z0 425 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ASB2Q96Q27 587 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 OMDQ99983 421 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 DHRS12A0PJE2 317 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 LGR5O75473 907 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 RCAN1P53805 252 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SNAPC2Q13487 334 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 NAB1Q13506 487 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 EGFLAMQ63HQ2 1017 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SPOCD1Q6ZMY3 1216 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SSX6Q7RTT6 188 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CYP17A1P05093 508 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ATP5BP06576 529 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SLC41A1Q8IVJ1 513 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 PTCD3Q96EY7 689 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 MFSD1Q9H3U5 465 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 PGRP06401 933 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GTF2IRD2BQ6EKJ0 949 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GALNT18Q6P9A2 607 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GTF2IRD2Q86UP8 949 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ATXN2LQ8WWM7 1075 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 U3KQV3 271 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 PIGNO95427 931 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GALNT7Q86SF2 657 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 H0Y858 1186 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ORC5O43913 435 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 STAG3L1P0CL83 205 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 USP45Q70EL2 814 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 TMEM110Q86TL2 294 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ZKSCAN4Q969J2 545 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 FBXO9Q9UK97 447 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SNAP23O00161 211 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SLC28A1O00337 649 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms