RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TNNT3P45378 269 aaPredicted RBP27.3■■□□□ 1.96
HDAC3-201ENST00000305264 PXNP49023 591 aaPredicted RBP27.3■■□□□ 1.96
HDAC3-201ENST00000305264 EPHB1P54762 984 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 CDK16Q00536 496 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 MTM1Q13496 603 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 MORF4L2Q15014 288 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 QPCTQ16769 361 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 MAMSTRQ6ZN01 415 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 HOOK3Q86VS8 718 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 HCAR2Q8TDS4 363 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 C11orf16Q9NQ32 467 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 ANAPC5Q9UJX4 755 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 SHOC2Q9UQ13 582 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 K7ESF4 209 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ALDH1A2O94788 518 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 APBB3O95704 486 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 CTPS1P17812 591 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ITIH2P19823 946 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 HLA-DPA1P20036 260 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 DRG2P55039 364 aaKnown RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ZBTB16Q05516 673 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 CALCOCO2Q13137 446 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 UGP2Q16851 508 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 PPP1R21Q6ZMI0 780 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ERN2Q76MJ5 926 aaKnown RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 HDDC3Q8N4P3 179 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 HDAC8Q9BY41 377 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 UPK3BL1B0FP48 263 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ANKRD66B4E2M5 251 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 UPK3BL2E5RIL1 263 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 RNASEH2AO75792 299 aaKnown RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 SLC34A2O95436 690 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ALPIP09923 528 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ADRB3P13945 408 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 ABL2P42684 1182 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 GRIA4P48058 902 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 NEK3P51956 506 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 RPL26P61254 145 aaKnown RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 NUMA1Q14980 2115 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 TTC31Q49AM3 519 aaPredicted RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 PIP5KL1Q5T9C9 394 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 AGBL4Q5VU57 503 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 LINC00523Q86TU6 105 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 RASSF3Q86WH2 238 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 FBXL12Q9NXK8 326 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 EBF1Q9UH73 591 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 PHTF1Q9UMS5 762 aa27.29■■□□□ 1.96
HDAC3-201ENST00000305264 RPL26L1Q9UNX3 145 aaKnown RBP27.29■■□□□ 1.96
HDAC3-201ENST00000305264 A0A1W2PQ67 120 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 PAPSS2O95340 614 aaPredicted RBP27.28■■□□□ 1.96
HDAC3-201ENST00000305264 FGF1P05230 155 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 PIRTP0C851 137 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 ACADMP11310 421 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 SEMG2Q02383 582 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 FBXL19Q6PCT2 694 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 ZDHHC24Q6UX98 284 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 TTC7BQ86TV6 843 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 BBOF1Q8ND07 529 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 MCUQ8NE86 351 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 OMDQ99983 421 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 TPSD1Q9BZJ3 242 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 ANKZF1Q9H8Y5 726 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 ARNT2Q9HBZ2 717 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 CASS4Q9NQ75 786 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 SCML1Q9UN30 329 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 A0A0J9YYE9 177 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 SPINT1O43278 529 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 TRBC1P01850 177 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 CAND1Q86VP6 1230 aaKnown RBP27.28■■□□□ 1.96
HDAC3-201ENST00000305264 DNAAF3Q8N9W5 541 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 GANCQ8TET4 914 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 PWWP2AQ96N64 755 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 SERPINB12Q96P63 405 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 PCDH12Q9NPG4 1184 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 GDF3Q9NR23 364 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 ITM2BQ9Y287 266 aa27.28■■□□□ 1.96
HDAC3-201ENST00000305264 TPMTP51580 245 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 PLTPP55058 493 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 POLR2LP62875 67 aaKnown RBP27.27■■□□□ 1.96
HDAC3-201ENST00000305264 CDH17Q12864 832 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 ERCC6LQ2NKX8 1250 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 TMEM31Q5JXX7 168 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.27■■□□□ 1.96
HDAC3-201ENST00000305264 CAMKK1Q8N5S9 505 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 FBXO25Q8TCJ0 367 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 UBXN4Q92575 508 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 ART4Q93070 314 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 PRMT8Q9NR22 394 aaPredicted RBP27.27■■□□□ 1.96
HDAC3-201ENST00000305264 FAM114A2Q9NRY5 505 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 GGT7Q9UJ14 662 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 KMT2EQ8IZD2 1858 aa27.27■■□□□ 1.96
HDAC3-201ENST00000305264 A0A0U1RQS6 177 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 AVILO75366 819 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 TPH1P17752 444 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 XPAP23025 273 aaPredicted RBP27.26■■□□□ 1.95
HDAC3-201ENST00000305264 LRRC8BQ6P9F7 803 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 TSSK4Q6SA08 328 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 FAM131CQ96AQ9 280 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 MCCC1Q96RQ3 725 aaPredicted RBP27.26■■□□□ 1.95
HDAC3-201ENST00000305264 NEUROG2Q9H2A3 272 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms