RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 TRIM39Q9HCM9 518 aa12.21□□□□□ -0.45
PDGFD-201ENST00000302251 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.45
PDGFD-201ENST00000302251 E7ESA3 106 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 FMO4P31512 558 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 NOS2P35228 1153 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 NDUFV1P49821 464 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 DPYSQ14117 519 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 MAP1SQ66K74 1059 aaPredicted RBP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 TAS1R3Q7RTX0 852 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 FBXL20Q96IG2 436 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 USP29Q9HBJ7 922 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 COMMD8Q9NX08 183 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 PIM2Q9P1W9 311 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SF3B1O75533 1304 aaKnown RBP eCLIP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 H3BNX3 289 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 H3BRB1 525 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 NCAM2O15394 837 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 TPD52L2O43399 206 aaKnown RBP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SNAP91O60641 907 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 HK2P52789 917 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 PRKAA2P54646 552 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 THEM5Q8N1Q8 247 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 CNTD1Q8N815 330 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 NIPA2Q8N8Q9 360 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SPATA17Q96L03 361 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SH3GL1Q99961 368 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 ALG2Q9H553 416 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 TUT1Q9H6E5 874 aaKnown RBP12.21□□□□□ -0.46
PDGFD-201ENST00000302251 TRHDEQ9UKU6 1024 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 SQORQ9Y6N5 450 aa12.21□□□□□ -0.46
PDGFD-201ENST00000302251 MATN2O00339 956 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 BTN3A1O00481 513 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ARHGEF9O43307 516 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 FAM20BO75063 409 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 RECQL4O94761 1208 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CDH2P19022 906 aaPredicted RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 MATKP42679 507 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CYP4F2P78329 520 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 GPR158Q5T848 1215 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ZNF280DQ6N043 979 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 EPGNQ6UW88 154 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 TAMM41Q96BW9 452 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 FAM120BQ96EK7 910 aaKnown RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ABI2Q9NYB9 513 aaPredicted RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 EBF1Q9UH73 591 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 TSC22D2O75157 780 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SPATA31D3P0C874 917 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ARL2P36404 184 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 TPTEP56180 551 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 IKBKEQ14164 716 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 DGUOKQ16854 277 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SCARA3Q6AZY7 606 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SPATA31D4Q6ZUB0 917 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 GALNT5Q7Z7M9 940 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 PNPLA1Q8N8W4 532 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 HDAC10Q969S8 669 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 MTFMTQ96DP5 389 aaKnown RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 HGH1Q9BTY7 390 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 EPB41L1Q9H4G0 881 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 TRMT6Q9UJA5 497 aaKnown RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 TNFSF13BQ9Y275 285 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 GSNP06396 782 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 AKT1P31749 480 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 L1CAMP32004 1257 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 RPS9P46781 194 aaKnown RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 RAD51Q06609 339 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 MARC1Q5VT66 337 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 GCNT7Q6ZNI0 430 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 FAM35AQ86V20 835 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SIX5Q8N196 739 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ANKRD52Q8NB46 1076 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 MCRS1Q96EZ8 462 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 QKIQ96PU8 341 aaKnown RBP eCLIP12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ZFP14Q9HCL3 533 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CIDEBQ9UHD4 219 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 ST14Q9Y5Y6 855 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 SLC30A1Q9Y6M5 507 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 NUMBLQ9Y6R0 609 aa12.2□□□□□ -0.46
PDGFD-201ENST00000302251 CAPN14A8MX76 684 aa12.19□□□□□ -0.46
PDGFD-201ENST00000302251 EVPLLA8MZ36 301 aa12.19□□□□□ -0.46
PDGFD-201ENST00000302251 B4GALT4O60513 344 aa12.19□□□□□ -0.46
PDGFD-201ENST00000302251 F9P00740 461 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms