RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CRYL1Q9Y2S2 319 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 DTNAQ9Y4J8 743 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 A8MT66 165 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 SLC4A1P02730 911 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 KCNC1P48547 511 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 PRKAA2P54646 552 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 POU4F1Q01851 419 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 FOLH1Q04609 750 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 IRF5Q13568 498 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 PSMD5Q16401 504 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 TECRLQ5HYJ1 363 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 AFMIDQ63HM1 303 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ICA1LQ8NDH6 482 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 OR13J1Q8NGT2 312 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 EXT2Q93063 718 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 HDAC10Q969S8 669 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ADA2Q9NZK5 511 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 MARCH4Q9P2E8 410 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-204ENST00000300862 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 SLCO1B7G3V0H7 640 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF623O75123 536 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SERPINH1P50454 418 aaKnown RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 CDKN2DP55273 166 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 EFEMP1Q12805 493 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 CLEC6AQ6EIG7 209 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 UGT2A3Q6UWM9 527 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PIWIL4Q7Z3Z4 852 aaKnown RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PGAM4Q8N0Y7 254 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 LILRA2Q8N149 483 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 DCUN1D1Q96GG9 259 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 KLHL32Q96NJ5 620 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SLC25A51Q9H1U9 297 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 ALG9Q9H6U8 611 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 EFCAB1Q9HAE3 211 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TRMT13Q9NUP7 481 aaKnown RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 CCDC167Q9P0B6 97 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 DSEQ9UL01 958 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PRG3Q9Y2Y8 225 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SCN10AQ9Y5Y9 1956 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 A0A087X1B8 175 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PGM3O95394 542 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PIRTP0C851 137 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PDK3Q15120 406 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TLR1Q15399 786 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 MAPRE1Q15691 268 aaKnown RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 GPR158Q5T848 1215 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 OGFRL1Q5TC84 451 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SCML4Q8N228 414 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 CEP70Q8NHQ1 597 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 HMGCLL1Q8TB92 370 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 NMD3Q96D46 503 aaKnown RBP12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TRIM62Q9BVG3 475 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 TRPC7Q9HCX4 862 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 GMIPQ9P107 970 aa12.97□□□□□ -0.33
HIF3A-204ENST00000300862 HEATR9A2RTY3 570 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 CASQ2O14958 399 aaPredicted RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 NPHS1O60500 1241 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 IPO13O94829 963 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 ASGR1P07306 291 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 MMP2P08253 660 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 GK3PQ14409 553 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 CUZD1Q86UP6 607 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 GALNT4Q8N4A0 578 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 PDCD6IPQ8WUM4 868 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 TRIB2Q92519 343 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 IGSF8Q969P0 613 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 IMP4Q96G21 291 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 B3GALT6Q96L58 329 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 LRGUKQ96M69 825 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 PKP2Q99959 881 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 PCDHAC1Q9H158 963 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 UXTQ9UBK9 157 aaPredicted RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 TMCO1Q9UM00 188 aa12.96□□□□□ -0.33
HIF3A-204ENST00000300862 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.33
HIF3A-204ENST00000300862 SCN4AP35499 1836 aa12.96□□□□□ -0.34
HIF3A-204ENST00000300862 C15orf38-AP3S2A0A0A6YYH1 394 aa12.96□□□□□ -0.34
HIF3A-204ENST00000300862 SMIM31A0A1B0GVY4 71 aa12.96□□□□□ -0.34
HIF3A-204ENST00000300862 UBFD1O14562 309 aaKnown RBP12.96□□□□□ -0.34
HIF3A-204ENST00000300862 IGHA2P01877 340 aa12.96□□□□□ -0.34
HIF3A-204ENST00000300862 ASLP04424 464 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms