RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
PGAP3-201ENST00000300658 BUD23O43709 281 aaKnown RBP16.66■□□□□ 0.26
PGAP3-201ENST00000300658 HNRNPCL1O60812 293 aaKnown RBP16.66■□□□□ 0.26
PGAP3-201ENST00000300658 CD1EP15812 388 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 GLDCP23378 1020 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 SGSHP51688 502 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 RAB10P61026 200 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 RPS24P62847 133 aaKnown RBP16.66■□□□□ 0.26
PGAP3-201ENST00000300658 IL10RBQ08334 325 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 ELAVL2Q12926 359 aaKnown RBP16.66■□□□□ 0.26
PGAP3-201ENST00000300658 OR7D4Q8NG98 312 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 PPP4R1Q8TF05 950 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 OLFM1Q99784 485 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 HIPK3Q9H422 1215 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 CWH43Q9H720 699 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 ALOX15P16050 662 aaPredicted RBP16.66■□□□□ 0.26
PGAP3-201ENST00000300658 HADHAP40939 763 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 SLC12A1Q13621 1099 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 ELMO2Q96JJ3 720 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 CLSTN3Q9BQT9 956 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 PDFQ9HBH1 243 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 MTRRQ9UBK8 725 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 LRCH1Q9Y2L9 728 aa16.66■□□□□ 0.26
PGAP3-201ENST00000300658 LOC285095A0A1B0GVY8 99 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PRAMEF11O60813 436 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 CXCL10P02778 98 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 HMGA1P17096 107 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PARP15Q460N3 678 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 KHDC1Q4VXA5 237 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SLC9B1Q4ZJI4 515 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ZYG11AQ6WRX3 759 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PTAR1Q7Z6K3 402 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ENDOVQ8N8Q3 282 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 WDR60Q8WVS4 1066 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 NRG4Q8WWG1 115 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SCYL1Q96KG9 808 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PPP1R2P1Q96PQ5 205 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SHCBP1LQ9BZQ2 653 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 COG4Q9H9E3 785 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 VPS45Q9NRW7 570 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 MARCH4Q9P2E8 410 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ACOT9Q9Y305 439 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ZFP37Q9Y6Q3 630 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 HEATR9A2RTY3 570 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ZNF840PA6NDX5 716 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 MROH6A6NGR9 719 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 H3BNC9 293 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 COCHO43405 550 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 LDB2O43679 373 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 DLX3O60479 287 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 PIRTP0C851 137 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 HOXD9P28356 352 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ALDH7A1P49419 539 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 NAGLUP54802 743 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 TNK2Q07912 1038 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 UGP2Q16851 508 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SHKBP1Q8TBC3 707 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 SCG3Q8WXD2 468 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 HDAC10Q969S8 669 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ZNF512Q96ME7 567 aaPredicted RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 MRPL9Q9BYD2 267 aaKnown RBP16.65■□□□□ 0.26
PGAP3-201ENST00000300658 RNF38Q9H0F5 515 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 VCX3BQ9H321 246 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 VCX3AQ9NNX9 186 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 DNMT3LQ9UJW3 386 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 TMCO1Q9UM00 188 aa16.65■□□□□ 0.26
PGAP3-201ENST00000300658 ACSL4O60488 711 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 HSPA4LO95757 839 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 STMN1P16949 149 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 MPSTP25325 297 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 GRIA4P48058 902 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 SMARCB1Q12824 385 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 DENND1CQ8IV53 801 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 LRRC43Q8N309 656 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 POU5F2Q8N7G0 328 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 CLPTM1LQ96KA5 538 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 CDH19Q9H159 772 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
PGAP3-201ENST00000300658 TAGLN3Q9UI15 199 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 APOBEC2Q9Y235 224 aaKnown RBP16.64■□□□□ 0.25
PGAP3-201ENST00000300658 ANKRD6Q9Y2G4 727 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 HOXA2O43364 376 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 PAMP19021 973 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 RGRP47804 291 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 USP41Q3LFD5 358 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 RNF168Q8IYW5 571 aaPredicted RBP16.64■□□□□ 0.25
PGAP3-201ENST00000300658 LSMEM2Q8N112 164 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
PGAP3-201ENST00000300658 HEXDCQ8WVB3 486 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 SGF29Q96ES7 293 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 PRICKLE1Q96MT3 831 aaPredicted RBP16.64■□□□□ 0.25
PGAP3-201ENST00000300658 PRKD2Q9BZL6 878 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 COMMD8Q9NX08 183 aa16.64■□□□□ 0.25
PGAP3-201ENST00000300658 PLA2G4CQ9UP65 541 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms