RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CHD4Q14839 1912 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 PRMT3O60678 531 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 METTL18O95568 372 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CAMK1Q14012 370 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CHST15Q7LFX5 561 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 FNDC11Q9BVV2 318 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 LMAN2LQ9H0V9 348 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CCDC177Q9NQR7 707 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 IFNA6P05013 189 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 HTR7P34969 479 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 MNDAP41218 407 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 RGS1Q08116 209 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 ARMC12Q5T9G4 340 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 UNC93AQ86WB7 457 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CARNMT1Q8N4J0 409 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SOCS4Q8WXH5 440 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 ROPN1LQ96C74 230 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 MTMR8Q96EF0 704 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CLIC5Q9NZA1 410 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 GULP1Q9UBP9 304 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 PCDHGA3Q9Y5H0 932 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 GPR1P46091 355 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SGCGQ13326 291 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 DDI2Q5TDH0 399 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 IL1RAPQ9NPH3 570 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 DDX43Q9NXZ2 648 aaKnown RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 CLDN25C9JDP6 229 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 SLC25A12O75746 678 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 TIE1P35590 1138 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 XKRXQ6PP77 449 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CNTD1Q8N815 330 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SMAD5Q99717 465 aaKnown RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 WDR37Q9Y2I8 494 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 NADKO95544 446 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 CYP1A2P05177 515 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 FGFR1P11362 822 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SETMARQ53H47 684 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 TMC8Q8IU68 726 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 APOL2Q9BQE5 337 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 GPC6Q9Y625 555 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 SLC30A4O14863 429 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 ERP29P30040 261 aaKnown RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 STXBP5Q5T5C0 1151 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 HPS1Q92902 700 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SP140LQ9H930 580 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 SMPD3Q9NY59 655 aaPredicted RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 GNEQ9Y223 722 aaKnown RBP11.35□□□□□ -0.59
GCN1-201ENST00000300648 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
GCN1-201ENST00000300648 CBX4O00257 560 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 KPNA3O00505 521 aaPredicted RBP11.34□□□□□ -0.59
GCN1-201ENST00000300648 GRIA4P48058 902 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 BACE1P56817 501 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 IFI35P80217 286 aaPredicted RBP11.34□□□□□ -0.59
GCN1-201ENST00000300648 ULK3Q6PHR2 472 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 CDYL2Q8N8U2 506 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 MLXQ9UH92 298 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SLC37A4O43826 429 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 PFKFB4Q16877 469 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SPATS1Q496A3 300 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
GCN1-201ENST00000300648 SULT1C3Q6IMI6 304 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 FAM131AQ6UXB0 335 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 TRMT11Q7Z4G4 463 aaKnown RBP11.34□□□□□ -0.59
GCN1-201ENST00000300648 APBA2Q99767 749 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 TBCDQ9BTW9 1192 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SPEF2Q9C093 1822 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SIN3BO75182 1162 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SLC22A3O75751 556 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 CABYRO75952 493 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 QSOX2Q6ZRP7 698 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 THAP5Q7Z6K1 395 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 FAM131BQ86XD5 332 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 CAMKK1Q8N5S9 505 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 AASSQ9UDR5 926 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 MSL3P1P0C860 447 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 ACADMP11310 421 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SSTR1P30872 391 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 ZNF143P52747 638 aaPredicted RBP11.34□□□□□ -0.59
GCN1-201ENST00000300648 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 SMARCB1Q12824 385 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 OR2T34Q8NGX1 318 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 OR2T3Q8NH03 318 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 ABCC13Q9NSE7 274 aa11.34□□□□□ -0.59
GCN1-201ENST00000300648 DNAJC28Q9NX36 388 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms