RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 CCNHP51946 323 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 THOP1P52888 689 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TBX4P57082 545 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SULT2A1Q06520 285 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRIP4Q15650 581 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PDCD2Q16342 344 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SFT2D3Q587I9 215 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GLB1LQ6UWU2 654 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RNF111Q6ZNA4 994 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CTU1Q7Z7A3 348 aaKnown RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NCSTNQ92542 709 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF419Q96HQ0 510 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FEM1CQ96JP0 617 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CATSPER2Q96P56 530 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PAPOLBQ9NRJ5 636 aaKnown RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GTSE1Q9NYZ3 720 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 VWA7Q9Y334 891 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FRMPD3Q5JV73 1810 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PRSS51A0A1B0GVH4 220 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 A0A1W2PQH9 124 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FAM92AA1XBS5 289 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SYN3O14994 580 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UBDO15205 165 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SEPT4O43236 478 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RNASEH1O60930 286 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RTN3O95197 1032 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 C8BP07358 591 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PABPC4LP0CB38 370 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 COL6A1P12109 1028 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 OGNP20774 298 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AQP4P55087 323 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FCGRTP55899 365 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RING1Q06587 406 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SMARCB1Q12824 385 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DYNC1I2Q13409 638 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PTK2BQ14289 1009 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LPIN1Q14693 890 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PDK3Q15120 406 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LIN52Q52LA3 116 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 HECTD2Q5U5R9 776 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MRNIPQ6NTE8 343 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PRMT9Q6P2P2 845 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GOLM1Q8NBJ4 401 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AGR3Q8TD06 166 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ROPN1LQ96C74 230 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TUBGCP5Q96RT8 1024 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SH3GL3Q99963 347 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ADAM2Q99965 735 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NOL6Q9H6R4 1146 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SLC2A6Q9UGQ3 507 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RIMS3Q9UJD0 308 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 INPP5FQ9Y2H2 1132 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LOC285095A0A1B0GVY8 99 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DYTNA2CJ06 578 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DRGXA6NNA5 263 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PSMD12O00232 456 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ACOT8O14734 319 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MGEA5O60502 916 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 VPS4BO75351 444 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZMPSTE24O75844 475 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 STAMBPO95630 424 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PBX3P40426 434 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SUOXP51687 545 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 USP46P62068 366 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FOLH1Q04609 750 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DSC1Q08554 894 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CEACAM7Q14002 265 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CSHL1Q14406 222 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ADRM1Q16186 407 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LPCAT4Q643R3 524 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CUZD1Q86UP6 607 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TICAM1Q8IUC6 712 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRPV1Q8NER1 839 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RHEBL1Q8TAI7 183 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SPPL2BQ8TCT7 592 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF483Q8TF39 744 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DCUN1D1Q96GG9 259 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 EFHD1Q9BUP0 239 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SFMBT1Q9UHJ3 866 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TMCO1Q9UM00 188 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PADI4Q9UM07 663 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 COMMD3-BMI1R4GMX3 469 aa10.06□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ANKRD36A6QL64 1941 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CCDC166P0CW27 439 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 XRCC1P18887 633 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CTGFP29279 349 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 STX1BP61266 288 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PSME3P61289 254 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PRAMEP78395 509 aa10.05□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CREB5Q02930 508 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms