RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CCDC90BQ9GZT6 254 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 PDZD7Q9H5P4 517 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 ITGB1BP2Q9UKP3 347 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 M0QYT0 321 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SYNCRIPO60506 623 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 JCHAINP01591 159 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 ATICP31939 592 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PTPN9P43378 593 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 TAS2R39P59534 338 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PIGFQ07326 219 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 TNK2Q07912 1038 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 POLD3Q15054 466 aaPredicted RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 IMPG1Q17R60 797 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 TMEM110Q86TL2 294 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PELI3Q8N2H9 469 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 RYBPQ8N488 228 aaPredicted RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 DNAJB14Q8TBM8 379 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SNX19Q92543 992 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 EIF2AQ9BY44 585 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SETD4Q9NVD3 440 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 LRRC37AA6NMS7 1700 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 A0A0J9YYE9 177 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 MAN1A2O60476 641 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 KCNA5P22460 613 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 ATP5F1P24539 256 aaPredicted RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 RCVRNP35243 200 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 GLUD2P49448 558 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 LSM3P62310 102 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 TMTC4Q5T4D3 741 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 INTS11Q5TA45 600 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 EFCAB12Q6NXP0 572 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SLC26A9Q7LBE3 791 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PARP8Q8N3A8 854 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PACRGLQ8N7B6 248 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SLC35F5Q8WV83 523 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 EML4Q9HC35 981 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 ARMC1Q9NVT9 282 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 KIAA1257Q9ULG3 409 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 GINS2Q9Y248 185 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 TCAF1Q9Y4C2 921 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PPEF2O14830 753 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 AQP9O43315 295 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 CES1P23141 567 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 IDUAP35475 653 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 CDH13P55290 713 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 FRG1Q14331 258 aaKnown RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 CCNYL2Q5T2Q4 361 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 EXOC8Q8IYI6 725 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF280CQ8ND82 737 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 IPMKQ8NFU5 416 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 SGCDQ92629 289 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 HDAC11Q96DB2 347 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 MLPHQ9BV36 600 aaPredicted RBP10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PTPRHQ9HD43 1115 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 FZD10Q9ULW2 581 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 PTGDR2Q9Y5Y4 395 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 WDR81Q562E7 1941 aa10.32□□□□□ -0.76
LMX1A-201ENST00000294816 ARPC2O15144 300 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 NPHS1O60500 1241 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RSL1D1O76021 490 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 FARP2O94887 1054 aaPredicted RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 IQCF3P0C7M6 154 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ERCC2P18074 760 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ATP6AP1Q15904 470 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF470Q6ECI4 717 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 OTOP3Q7RTS5 596 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ANKRD13AQ8IZ07 590 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CLEC4FQ8N1N0 589 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SFRP1Q8N474 314 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ITPKCQ96DU7 683 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CELF6Q96J87 481 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 MUS81Q96NY9 551 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SLX1AQ9BQ83 275 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TEX13BQ9BXU2 312 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 LHPPQ9H008 270 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ATXN3LQ9H3M9 355 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CASS4Q9NQ75 786 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 AGPAT4Q9NRZ5 378 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RIC8BQ9NVN3 520 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF229Q9UJW7 825 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 PSME2Q9UL46 239 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TPD52L2O43399 206 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 HUS1O60921 280 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 LDLRP01130 860 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 IL7RP16871 459 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ALDH4A1P30038 563 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 HADHAP40939 763 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TPI1P60174 286 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms