RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 GOLGA6CA6NDK9 693 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 ESPNB1AK53 854 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 TSPAN6O43657 245 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 NDUFS2O75306 463 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PMPCBO75439 489 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 NDST3O95803 873 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GAS8O95995 478 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GOLGA6DP0CG33 693 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 ETS1P14921 441 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 XPAP23025 273 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 NFKBIAP25963 317 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 RPL22P35268 128 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 FDFT1P37268 417 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 MMP12P39900 470 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 WNT3AP56704 352 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 CDK18Q07002 472 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 CKAP4Q07065 602 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 WHAMMP3Q1A5X7 153 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 KCTD11Q693B1 232 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PRUNE1Q86TP1 453 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PAF1Q8N7H5 531 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SPATA4Q8NEY3 305 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SCRN2Q96FV2 425 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GPR174Q9BXC1 333 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 ADGRE3Q9BY15 652 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 DUSP15Q9H1R2 295 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GOLGA6AQ9NYA3 693 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 UBP1Q9NZI7 540 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 TPX2Q9ULW0 747 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 MRFAP1Q9Y605 127 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SCN8AQ9UQD0 1980 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 MYLKQ15746 1914 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 A0A0J9YYE9 177 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ERI2A8K979 691 aaKnown RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ANKRD66B4E2M5 251 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 F5H423 210 aaPredicted RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ECEL1O95672 775 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 TRBC1P01850 177 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 KRT14P02533 472 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ATXN1LP0C7T5 689 aaKnown RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ZSCAN5DPP0CG00 497 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ADRA1AP35348 466 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 RPL6Q02878 288 aaKnown RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 PCSK7Q16549 785 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 PLK5Q496M5 336 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 TMEM52BQ4KMG9 183 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 LRRC73Q5JTD7 316 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 KIAA1161Q6NSJ0 714 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ERAP2Q6P179 960 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 DPPA4Q7L190 304 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 TRIM69Q86WT6 500 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 NDUFAF2Q8N183 169 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 LPCAT1Q8NF37 534 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 IPMKQ8NFU5 416 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 IFT43Q96FT9 208 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 LYSMD1Q96S90 227 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 C6orf106Q9H6K1 298 aaPredicted RBP13.31□□□□□ -0.28
CCDC42-201ENST00000293845 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 R4GN57 208 aa13.31□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3DA0A087WVF3 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3IA0A087WXS9 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3EA0A087X179 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3KA0A087X1G2 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3FA6NER0 549 aaPredicted RBP13.3□□□□□ -0.28
CCDC42-201ENST00000293845 CAPN8A6NHC0 703 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3LB9A6J9 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 PSMD3O43242 534 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 LATO43561 262 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 AP2A1O95782 977 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3HP0C7X1 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
CCDC42-201ENST00000293845 ITIH2P19823 946 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 HLA-DPA1P20036 260 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 NBL1P41271 181 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 PTGIRP43119 386 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 CCR5P51681 352 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 EPHB1P54762 984 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 PPP2CBP62714 309 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 PPP2CAP67775 309 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 RALGDSQ12967 914 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 SIM2Q14190 667 aaPredicted RBP13.3□□□□□ -0.28
CCDC42-201ENST00000293845 ELF2Q15723 593 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 QPCTQ16769 361 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 FAXCQ5TGI0 409 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 KIAA0895LQ68EN5 471 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3GQ6DHY5 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 TBC1D3CQ6IPX1 549 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 RANBP10Q6VN20 620 aa13.3□□□□□ -0.28
CCDC42-201ENST00000293845 SYDE1Q6ZW31 735 aaPredicted RBP13.3□□□□□ -0.28
CCDC42-201ENST00000293845 USP45Q70EL2 814 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms