RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 FNIP2Q9P278 1114 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 PRG3Q9Y2Y8 225 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ASB3Q9Y575 518 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 SDHDO14521 159 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 CFLARO15519 480 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 RNASEH1O60930 286 aaKnown RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MMP2P08253 660 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ENO3P13929 434 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 RHOQP17081 205 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 LEPRP48357 1165 aaKnown RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 AQP4P55087 323 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 DSC1Q08554 894 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 HERC3Q15034 1050 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MSANTD2Q6P1R3 559 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 CALML6Q8TD86 181 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 GPR152Q8TDT2 470 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MAELQ96JY0 434 aaKnown RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 TUBGCP5Q96RT8 1024 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 RANBP9Q96S59 729 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ZYG11BQ9C0D3 744 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 RNF208Q9H0X6 261 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 GMIPQ9P107 970 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 FIS1Q9Y3D6 152 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 CCL22O00626 93 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 OAZ2O95190 189 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 CCDC166P0CW27 439 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SLC2A3P11169 496 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 MSX2P35548 267 aaPredicted RBP15.16■□□□□ 0.02
CCDC116-201ENST00000292779 CLCN5P51795 746 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 PKNOX1P55347 436 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SULT2A1Q06520 285 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 EFEMP1Q12805 493 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 MBTPS1Q14703 1052 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 PSMD5Q16401 504 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 ZNF423Q2M1K9 1284 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 PIGGQ5H8A4 983 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 AGAP9Q5VTM2 703 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 TRAF7Q6Q0C0 670 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 RPS27LQ71UM5 84 aaKnown RBP15.16■□□□□ 0.02
CCDC116-201ENST00000292779 PTAR1Q7Z6K3 402 aaPredicted RBP15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SDCCAG8Q86SQ7 713 aaPredicted RBP15.16■□□□□ 0.02
CCDC116-201ENST00000292779 ZNF354CQ86Y25 554 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SLC43A3Q8NBI5 491 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 GLT1D1Q96MS3 346 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 WDR41Q9HAD4 459 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SP110Q9HB58 689 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 TMEM248Q9NWD8 314 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
CCDC116-201ENST00000292779 A8MT66 165 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 CASQ2O14958 399 aaPredicted RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 LTA4HP09960 611 aaKnown RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 CKBP12277 381 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 XRCC1P18887 633 aaPredicted RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 DPP6P42658 865 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 PFKPQ01813 784 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 CEACAM7Q14002 265 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 LDB1Q86U70 411 aaPredicted RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 COLGALT2Q8IYK4 626 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 DCP1BQ8IZD4 617 aaKnown RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 PGAM4Q8N0Y7 254 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 LINC01599Q8WXQ3 324 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 USP13Q92995 863 aaPredicted RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TNFRSF12AQ9NP84 129 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 VPS45Q9NRW7 570 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 VPS28Q9UK41 221 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 PHF24Q9UPV7 400 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 VWA8A3KMH1 1905 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 STX16-NPEPL1H3BU86 382 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TADA2AO75478 443 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 IPO13O94829 963 aaKnown RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TBX18O95935 607 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 PLK1P53350 603 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 ART3Q13508 389 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 HECTD2Q5U5R9 776 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 FOXB2Q5VYV0 432 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 SLC24A5Q71RS6 500 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 CILP2Q8IUL8 1156 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 RNF148Q8N7C7 305 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 OR6P1Q8NGX9 317 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 CEP70Q8NHQ1 597 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 ANKRD49Q8WVL7 239 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 IGSF8Q969P0 613 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 NPAS2Q99743 824 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TSEN34Q9BSV6 310 aaKnown RBP15.15■□□□□ 0.02
CCDC116-201ENST00000292779 FBXO44Q9H4M3 255 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 EFCAB1Q9HAE3 211 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 STARD7Q9NQZ5 370 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 PDP2Q9P2J9 529 aa15.15■□□□□ 0.02
CCDC116-201ENST00000292779 TCAF2A6NFQ2 919 aa15.14■□□□□ 0.01
CCDC116-201ENST00000292779 SMIM24O75264 130 aa15.14■□□□□ 0.01
CCDC116-201ENST00000292779 SNUPNO95149 360 aaKnown RBP15.14■□□□□ 0.01
CCDC116-201ENST00000292779 EOMESO95936 686 aa15.14■□□□□ 0.01
CCDC116-201ENST00000292779 UQCRBP14927 111 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms