RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 HLA-DQA1Q5Y7H0 255 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PWWP2AQ96N64 755 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 DNAJC28Q9NX36 388 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 C1orf232A0A0U1RR37 186 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 RHOQP17081 205 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 NOS3P29474 1203 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 TRAF3Q13114 568 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 NEDD8Q15843 81 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 ABRAXAS1Q6UWZ7 409 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 TBCDQ9BTW9 1192 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 OSBPL11Q9BXB4 747 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 TMPRSS4Q9NRS4 437 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 CORO1CQ9ULV4 474 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 FAM25AB3EWG3 89 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 FAM25CB3EWG5 89 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 FAM25GB3EWG6 89 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PAPSS1O43252 624 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 TSPAN1O60635 241 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 KCNJ2P63252 427 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 ARMC4Q5T2S8 1044 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 Q96MT0 163 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 GBA3Q9H227 469 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 SERHL2Q9H4I8 314 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 SERHLQ9NQF3 203 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CTBP1Q13363 440 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 METTL21CQ5VZV1 264 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 DEPDC4Q8N2C3 294 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 WDR36Q8NI36 951 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 ITCHQ96J02 903 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 VPS4AQ9UN37 437 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 AVILO75366 819 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CAPN15O75808 1086 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 UQCRBP14927 111 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 GPR1P46091 355 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MBTD1Q05BQ5 628 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 LACTB2Q53H82 288 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 BROXQ5VW32 411 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CPT1BQ92523 772 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MTFMTQ96DP5 389 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MCCC1Q96RQ3 725 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MUC13Q9H3R2 512 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 FETUBQ9UGM5 382 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 TBC1D3BA6NDS4 549 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CCNA2P20248 432 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 NR1H2P55055 460 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 PFKPQ01813 784 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 DOK6Q6PKX4 331 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 C1orf127Q8N9H9 656 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 TCF12Q99081 682 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 COPS8Q99627 209 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 NOCTQ9UK39 431 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 COQ4Q9Y3A0 265 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MFHAS1Q9Y4C4 1052 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SMIM31A0A1B0GVY4 71 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 AP2A1O95782 977 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 VAV1P15498 845 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 ADSSP30520 456 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 MC4RP32245 332 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 FLT3P36888 993 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CRATP43155 626 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 TCEA2Q15560 299 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SNRNP27Q8WVK2 155 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 OMDQ99983 421 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 SLC12A4Q9UP95 1085 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
PTCD1-201ENST00000292478 RIPK3Q9Y572 518 aa12.84□□□□□ -0.35
PTCD1-201ENST00000292478 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.35
PTCD1-201ENST00000292478 FYNP06241 537 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 SLURP2P0DP57 97 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 NOGQ13253 232 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms