RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ATP13A3Q9H7F0 1226 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNF8-201ENST00000290330 ETNK2Q9NVF9 386 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 ANAPC7Q9UJX3 599 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 PNMA8BQ9ULN7 279 aaPredicted RBP10.55□□□□□ -0.72
SNF8-201ENST00000290330 ATP8A1Q9Y2Q0 1164 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 RAXQ9Y2V3 346 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 COQ6Q9Y2Z9 468 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 U3KQA8 63 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 KNTC1P50748 2209 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 TRAFD1O14545 582 aaPredicted RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 TPP1O14773 563 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 PEX11BO96011 259 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 PRKCGP05129 697 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 CYP1A2P05177 515 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 GP1BAP07359 652 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 C6P13671 934 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 CASP14P31944 242 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 MMP12P39900 470 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 LIG3P49916 1009 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 SCNN1BP51168 640 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 SEMG2Q02383 582 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 BCL2L1Q07817 233 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 LRRC14Q15048 493 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 AGERQ15109 404 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 IRF4Q15306 451 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 CCDC122Q5T0U0 273 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 ZCCHC8Q6NZY4 707 aaKnown RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 LRRC8AQ8IWT6 810 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 PHACTR4Q8IZ21 702 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 RBFAQ8N0V3 343 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 DCBLD1Q8N8Z6 715 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 LMX1AQ8TE12 382 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 TBATAQ96M53 351 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 NSMCE3Q96MG7 304 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 ZNF599Q96NL3 588 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 NUP85Q9BW27 656 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 TCEAL2Q9H3H9 227 aaPredicted RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 USP29Q9HBJ7 922 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 PCDH18Q9HCL0 1135 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 SPASTQ9UBP0 616 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 SEPT3Q9UH03 358 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
SNF8-201ENST00000290330 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
SNF8-201ENST00000290330 FREM2Q5SZK8 3169 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 MYO1FO00160 1098 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 LZTS3O60299 673 aaPredicted RBP10.53□□□□□ -0.72
SNF8-201ENST00000290330 OPA1O60313 960 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 MAFKO60675 156 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 GCATO75600 419 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 MT-CO3P00414 261 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 CR2P20023 1033 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 IL4RP24394 825 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
SNF8-201ENST00000290330 PEX5P50542 639 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
SNF8-201ENST00000290330 RENBPP51606 427 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 AP1S1P61966 158 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 POLR2LP62875 67 aaKnown RBP10.53□□□□□ -0.72
SNF8-201ENST00000290330 PPARDQ03181 441 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 RALGDSQ12967 914 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 C1orf61Q13536 156 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 TRIM14Q14142 442 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 INPP5AQ14642 412 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 RTP5Q14D33 572 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 PRRT3Q5FWE3 981 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 FAXCQ5TGI0 409 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 PGBD5Q8N414 524 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 KIAA1524Q8TCG1 905 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 NXPE2Q96DL1 559 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 IL12RB2Q99665 862 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 EVA1BQ9NVM1 165 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
SNF8-201ENST00000290330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNF8-201ENST00000290330 TDRD6O60522 2096 aaKnown RBP10.53□□□□□ -0.72
SNF8-201ENST00000290330 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.52□□□□□ -0.73
SNF8-201ENST00000290330 TTC24A2A3L6 582 aaPredicted RBP10.52□□□□□ -0.73
SNF8-201ENST00000290330 EME2A4GXA9 379 aaPredicted RBP10.52□□□□□ -0.73
SNF8-201ENST00000290330 TMEM110-MUSTN1A8MSY1 372 aa10.52□□□□□ -0.73
SNF8-201ENST00000290330 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
SNF8-201ENST00000290330 RECQL5O94762 991 aaPredicted RBP10.52□□□□□ -0.73
SNF8-201ENST00000290330 TSHRP16473 764 aa10.52□□□□□ -0.73
SNF8-201ENST00000290330 SERPINB6P35237 376 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms