RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 ETNK2Q9NVF9 386 aa15.41■□□□□ 0.06
PDE6D-201ENST00000287600 EVA1BQ9NVM1 165 aa15.41■□□□□ 0.06
PDE6D-201ENST00000287600 NLGN3Q9NZ94 848 aa15.41■□□□□ 0.06
PDE6D-201ENST00000287600 NEMP2A6NFY4 417 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 H3BM21 787 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 PRAMEF11O60813 436 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 TMCC1O94876 653 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 CKMT1AP12532 417 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 ARSEP51690 589 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 RHOAP61586 193 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 HNRNPKP61978 463 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 SNRPD1P62314 119 aaKnown RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 CCDC173Q0VFZ6 552 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 DPYSL3Q14195 570 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 PDK2Q15119 407 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 TBC1D25Q3MII6 688 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 INO80DQ53TQ3 878 aaPredicted RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 PARS2Q7L3T8 475 aaKnown RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 DCP2Q8IU60 420 aaKnown RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 MAP7D3Q8IWC1 876 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 TP53INP2Q8IXH6 220 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 OR2AP1Q8NGE2 309 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 OR6K2Q8NGY2 324 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 IFT43Q96FT9 208 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 APOLD1Q96LR9 279 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 DEPDC7Q96QD5 511 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 SLC17A9Q9BYT1 436 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 RCOR3Q9P2K3 495 aaPredicted RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 UBA2Q9UBT2 640 aaPredicted RBP15.4■□□□□ 0.06
PDE6D-201ENST00000287600 HYOU1Q9Y4L1 999 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 PCDHB1Q9Y5F3 818 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 FADS3Q9Y5Q0 445 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 IGSF10Q6WRI0 2623 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 SHROOM3Q8TF72 1996 aa15.4■□□□□ 0.06
PDE6D-201ENST00000287600 KRIT1O00522 736 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 PAK4O96013 591 aaPredicted RBP15.39■□□□□ 0.05
PDE6D-201ENST00000287600 GSRP00390 522 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 GIMD1P0DJR0 217 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 TNNT1P13805 278 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 GKP32189 559 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 SLC1A1P43005 524 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 FGL2Q14314 439 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 CYTH1Q15438 398 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 ATXN7L2Q5T6C5 722 aaPredicted RBP15.39■□□□□ 0.05
PDE6D-201ENST00000287600 ARHGAP36Q6ZRI8 547 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 PARGQ86W56 976 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 PLPP6Q8IY26 295 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 FEM1CQ96JP0 617 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 GDAP1L1Q96MZ0 367 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 DUSP23Q9BVJ7 150 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 PRORYQ9H606 182 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 SP110Q9HB58 689 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 PDFQ9HBH1 243 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 IPO11Q9UI26 975 aaKnown RBP15.39■□□□□ 0.05
PDE6D-201ENST00000287600 REXO2Q9Y3B8 237 aaKnown RBP15.39■□□□□ 0.05
PDE6D-201ENST00000287600 HS3ST3A1Q9Y663 406 aa15.39■□□□□ 0.05
PDE6D-201ENST00000287600 LRRD1A4D1F6 860 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RCCD1A6NED2 376 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 POM121BA6NF01 834 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 NEMP1O14524 444 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 SCAMP1O15126 338 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RAD51BO15315 384 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 AP1G1O43747 822 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 SPOPO43791 374 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 OPA1O60313 960 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 BUB1BO60566 1050 aaPredicted RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 PALMO75781 387 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 NEBLO76041 1014 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 POP4O95707 220 aaKnown RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 IGSF6O95976 241 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 MYF5P13349 255 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 COMTP21964 271 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 KDELR1P24390 212 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 SERPINB6P35237 376 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RABIFP47224 123 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 DUSP3P51452 185 aaPredicted RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 HADHBP55084 474 aaKnown RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 IL10RBQ08334 325 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 SGCGQ13326 291 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 PDE1CQ14123 709 aaPredicted RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 FZD2Q14332 565 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 MYLK3Q32MK0 819 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ANKRD20A8PQ5CZ79 823 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ZSCAN30Q86W11 494 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RHOT1Q8IXI2 618 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ACRBPQ8NEB7 543 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
PDE6D-201ENST00000287600 PCDH19Q8TAB3 1148 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RAPGEF5Q92565 580 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 BMFQ96LC9 184 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 LGMNQ99538 433 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ZNF670Q9BS34 389 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ABCG4Q9H172 646 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 USP29Q9HBJ7 922 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 GPR27Q9NS67 375 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 RAI2Q9Y5P3 530 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 ALG6Q9Y672 507 aa15.38■□□□□ 0.05
PDE6D-201ENST00000287600 A0A0A6YYK5 440 aaPredicted RBP15.37■□□□□ 0.05
PDE6D-201ENST00000287600 K7ESM1 405 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms