RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ERVW-1Q9UQF0 538 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 RAI2Q9Y5P3 530 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 H0Y858 1186 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 GBE1Q04446 702 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 PRSS55Q6UWB4 352 aaPredicted RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 ZNF384Q8TF68 577 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 RNF145Q96MT1 663 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 ACAT2Q9BWD1 397 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 MAGEH1Q9H213 219 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 RERGLQ9H628 205 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 DDX28Q9NUL7 540 aaKnown RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 H3BQF6 201 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 TOMM20Q15388 145 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 GPR135Q8IZ08 494 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 OR4K2Q8NGD2 314 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 GFM2Q969S9 779 aaKnown RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 LINGO1Q96FE5 620 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 TBCDQ9BTW9 1192 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 MRPS33Q9Y291 106 aaKnown RBP18.62■□□□□ 0.57
PCDH1-201ENST00000287008 OR10H1Q9Y4A9 318 aa18.62■□□□□ 0.57
PCDH1-201ENST00000287008 H3BN98 237 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ANXA6P08133 673 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 IFNGR2P38484 337 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ZNF618Q5T7W0 954 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 GPRIN3Q6ZVF9 776 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 OR14C36Q8NHC7 312 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 TMEM216Q9P0N5 145 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ARMCX1Q9P291 453 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ACTL7BQ9Y614 415 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 LRIG2O94898 1065 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 CXCR3P49682 368 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 BIKQ13323 160 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 TXNDC11Q6PKC3 985 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 CLP1Q92989 425 aaKnown RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 PHACTR1Q9C0D0 580 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 KCNK4Q9NYG8 393 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 XPR1Q9UBH6 696 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 GULP1Q9UBP9 304 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 SAC3D1A6NKF1 404 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 PRR23D1E9PI22 279 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 RGS5O15539 181 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 PRR23D2P0DMB1 279 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 PAICSP22234 425 aaKnown RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 CDH4P55283 916 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 TRIP4Q15650 581 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 CASP12Q6UXS9 341 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 LUZP2Q86TE4 346 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 PHC3Q8NDX5 983 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 WARSP23381 471 aaKnown RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 DUPD1Q68J44 220 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 CDRT15Q96T59 188 aa18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ARIH1Q9Y4X5 557 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-201ENST00000287008 ATG7O95352 703 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 CORO7P57737 925 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 DAOAP59103 153 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 IL5RAQ01344 420 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 FOXR1Q6PIV2 292 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 APTXQ7Z2E3 356 aaKnown RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 RASAL3Q86YV0 1011 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 RAVER1Q8IY67 606 aaKnown RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 FAXDC2Q96IV6 333 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 RHOJQ9H4E5 214 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 DLGAP2Q9P1A6 1054 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 KCNU1A8MYU2 1149 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 RECQL5O94762 991 aaPredicted RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 FYNP06241 537 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 PSMD8P48556 350 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 POU5F1Q01860 360 aaKnown RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 STK32CQ86UX6 486 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 TSEN2Q8NCE0 465 aaKnown RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ASB3Q9Y575 518 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 GLYATL1P3A0A0U1RQE8 302 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ALOX15BO15296 676 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ERAL1O75616 437 aaKnown RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 MAPKAPK3Q16644 382 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 IDSP22304 550 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 GRIA4P48058 902 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 CBX2Q14781 532 aaPredicted RBP18.6■□□□□ 0.57
PCDH1-201ENST00000287008 CERCAMQ5T4B2 595 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 LINGO4Q6UY18 593 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 PARGQ86W56 976 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 GPR156Q8NFN8 814 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 OR7D4Q8NG98 312 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ITFG1Q8TB96 612 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 HERVK_113Q902F9 699 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ART4Q93070 314 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 GPR88Q9GZN0 384 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 ATP6V1HQ9UI12 483 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 RABGEF1Q9UJ41 708 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 AP4S1Q9Y587 144 aa18.6■□□□□ 0.57
PCDH1-201ENST00000287008 MFSD11O43934 449 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 PKMP14618 531 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 VAV1P15498 845 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 MAPKAPK2P49137 400 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 GAD2Q05329 585 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms