RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FAM45BPQ6NSW5 357 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 NIPAL1Q6NVV3 410 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TMEM53Q6P2H8 277 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 DCLRE1AQ6PJP8 1040 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 KIAA0408Q6ZU52 694 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CATSPER4Q7RTX7 472 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM72BQ86X60 149 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SLC15A3Q8IY34 581 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SIX6OS1Q8N1H7 587 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CENPSQ8N2Z9 138 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 RNF169Q8NCN4 708 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ACVR1CQ8NER5 493 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM45AQ8TCE6 357 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FCRL5Q96RD9 977 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 GPATCH1Q9BRR8 931 aaKnown RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 OSBPL2Q9H1P3 480 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CCDC68Q9H2F9 335 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ANLNQ9NQW6 1124 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CHRAC1Q9NRG0 131 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 NCKIPSDQ9NZQ3 722 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 PCDHGA7Q9Y5G6 932 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 STX16-NPEPL1H3BU86 382 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 I6L893 689 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 ESRRBO95718 433 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 MMP3P08254 477 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ATP5F1P24539 256 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 CCNCP24863 283 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 GABRB3P28472 473 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 LILRA4P59901 499 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 POU4F1Q01851 419 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 RHDQ02161 417 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TRIM25Q14258 630 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 USP10Q14694 798 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 SPATS1Q496A3 300 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CCDC80Q76M96 950 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TP53INP2Q8IXH6 220 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 TNIP2Q8NFZ5 429 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TBC1D15Q8TC07 691 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CHPT1Q8WUD6 406 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 LRTOMTQ8WZ04 291 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 NXF3Q9H4D5 531 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 TMPRSS4Q9NRS4 437 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 RUVBL2Q9Y230 463 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 NEMP1O14524 444 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ADAM23O75077 832 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ZBTB11O95625 1053 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 PGK1P00558 417 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 AHSGP02765 367 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 INHBBP09529 407 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 HOXC13P31276 330 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ADRA1AP35348 466 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 NAGLUP54802 743 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 OLIG2Q13516 323 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 IRF5Q13568 498 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 LRP8Q14114 963 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ANKRD13AQ8IZ07 590 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 AFAP1L2Q8N4X5 818 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 FAM47BQ8NA70 645 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 DOK1Q99704 481 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 PTPN18Q99952 460 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 NEURL2Q9BR09 285 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CD300AQ9UGN4 299 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 GNPTGQ9UJJ9 305 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 PTCH2Q9Y6C5 1203 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CCL15-CCL14A0A0B4J2E2 113 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 GIPC1O14908 333 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 USP12O75317 370 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ANXA9O76027 345 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CSPG5O95196 566 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 AMHP03971 560 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 FUCA1P04066 466 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TCN1P20061 433 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 SLC7A1P30825 629 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CTBSQ01459 385 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 MOGQ16653 247 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CCL15Q16663 113 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 NHSL2Q5HYW2 709 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 UBXN11Q5T124 520 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 ZNF618Q5T7W0 954 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 KIAA0930Q6ICG6 404 aaPredicted RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 C16orf87Q6PH81 154 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 BHLHA9Q7RTU4 235 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 PACRGLQ8N7B6 248 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 AGR3Q8TD06 166 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 KCTD4Q8WVF5 259 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 FATE1Q969F0 183 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 TMA16Q96EY4 203 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 PPP1R10Q96QC0 940 aaKnown RBP10.44□□□□□ -0.74
SKA1-201ENST00000285116 CYP2S1Q96SQ9 504 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 SLC29A1Q99808 456 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 EFHD1Q9BUP0 239 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CXorf21Q9HAI6 301 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms