RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GMFBP60983 142 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SNTA1Q13424 505 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 LAPTM5Q13571 262 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 BEND5Q7L4P6 421 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GPR180Q86V85 440 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DAW1Q8N136 415 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ZCCHC9Q8N567 271 aaKnown RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 EMC1Q8N766 993 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 OR5T3Q8NGG3 340 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 OR6Y1Q8NGX8 325 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FNIP1Q8TF40 1166 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TPD52L3Q96J77 140 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ZCWPW1Q9H0M4 648 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 HIPK3Q9H422 1215 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TLE6Q9H808 572 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 WDR27A2RRH5 827 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 WNT10BO00744 389 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SRPRAP08240 638 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ZBTB48P10074 688 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SELPP16109 830 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 HSD17B2P37059 387 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 MYBPC1Q00872 1141 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ITPK1Q13572 414 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 LARS2Q15031 903 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 XKR6Q5GH73 641 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 WASHC2DQ5SRD0 308 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 CPTPQ5TA50 214 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF697Q5TEC3 545 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 LCN1P1Q5VSP4 162 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ZCCHC12Q6PEW1 402 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 STRADAQ7RTN6 431 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 EIF1ADQ8N9N8 165 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SLAIN1Q8ND83 568 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 TESCQ96BS2 214 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 CPB2Q96IY4 423 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SEPHS2Q99611 448 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 THUMPD1Q9NXG2 353 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 GULP1Q9UBP9 304 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 GPSM3Q9Y4H4 160 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 FAM92AA1XBS5 289 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 IFNA6P05013 189 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ATP4AP20648 1035 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 FMO4P31512 558 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 AP3S2P59780 193 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 AP1S1P61966 158 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 MAPKAPK3Q16644 382 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 PFKFB4Q16877 469 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 TMC5Q6UXY8 1006 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 MTDHQ86UE4 582 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SNX32Q86XE0 403 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 MPP5Q8N3R9 675 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SLC4A11Q8NBS3 891 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 TSPAN14Q8NG11 270 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF563Q8TA94 476 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SUN3Q8TAQ9 357 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 CLIP3Q96DZ5 547 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 RBM18Q96H35 190 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 HGH1Q9BTY7 390 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 C1orf50Q9BV19 199 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 RTFDC1Q9BY42 306 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 SNTG2Q9NY99 539 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 GNEQ9Y223 722 aaKnown RBP4.09□□□□□ -1.76
SCN3A-201ENST00000283254 ASF1AQ9Y294 204 aa4.09□□□□□ -1.76
SCN3A-201ENST00000283254 REM1O75628 298 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 LCA5LO95447 670 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 UBTFL6P0CB48 400 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 TARSP26639 723 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 LRPAP1P30533 357 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CLTCL1P53675 1640 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 GRB14Q14449 540 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 MAPK11Q15759 364 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 DPY19L1Q2PZI1 675 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 HKDC1Q2TB90 917 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PARP15Q460N3 678 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 FAM153CQ494X1 144 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PDSS1Q5T2R2 415 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CDH24Q86UP0 819 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF276Q8N554 614 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ANKRD52Q8NB46 1076 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 TTLQ8NG68 377 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 EPS8L3Q8TE67 593 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 C2orf15Q8WU43 125 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 KAT2BQ92831 832 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 HIST1H2AAQ96QV6 131 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RHBGQ9H310 441 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 EHD3Q9NZN3 535 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 DERAQ9Y315 318 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ASXL3Q9C0F0 2248 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 A0A087X0B3 334 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ISM1B1AKI9 464 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 F8VP50 259 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PER2O15055 1255 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 SSNA1O43805 119 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RASGRP1O95267 797 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 MNDAP41218 407 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CD86P42081 329 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 OMPP47874 163 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms