RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PAN2Q504Q3 1202 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 ARCQ7LC44 396 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 RASAL3Q86YV0 1011 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CCDC107Q8WV48 283 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 TMEM168Q9H0V1 697 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MARCH7Q9H992 704 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 MED11Q9P086 117 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 LRRIQ1Q96JM4 1722 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 ARL5CA6NH57 179 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 CES1P23141 567 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 GRK5P34947 590 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 SLC26A2P50443 739 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 CBX3Q13185 183 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 ATP13A4Q4VNC1 1196 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 EIF1ADQ8N9N8 165 aaKnown RBP8.77□□□□□ -1
NIPBL-201ENST00000282516 FBXO25Q8TCJ0 367 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 VCPIP1Q96JH7 1222 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 OMDQ99983 421 aa8.77□□□□□ -1
NIPBL-201ENST00000282516 TNS3Q68CZ2 1445 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ATF4P18848 351 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PLK1P53350 603 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ABRAQ8N0Z2 381 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 LRRC20Q8TCA0 184 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 GRIN3AQ8TCU5 1115 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 DAGLAQ9Y4D2 1042 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 TSPAN4O14817 238 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CCNKO75909 580 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PIGNO95427 931 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SUPT20HL2P0C7V6 817 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 COX4I1P13073 169 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 LSM3P62310 102 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 MED22Q15528 200 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 BEND5Q7L4P6 421 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 RAD51AP1Q96B01 352 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SYT15Q9BQS2 421 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 MAFFQ9ULX9 164 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CNTNAP5Q8WYK1 1306 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PPEF2O14830 753 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 NADKO95544 446 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 FTH1P02794 183 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PAEPP09466 180 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 HOXC6P09630 235 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 DAGLBQ8NCG7 672 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 OR2L3Q8NG85 312 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 DIRAS2Q96HU8 199 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 POLR1EQ9GZS1 481 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ANXA2P2A6NMY6 339 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SLC28A2O43868 658 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 MPZL2O60487 215 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ANXA2P07355 339 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 STOMP27105 288 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 NOS2P35228 1153 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF844Q08AG5 666 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 HHIPL2Q6UWX4 724 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SRFBP1Q8NEF9 429 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 TRNT1Q96Q11 434 aaKnown RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 GPATCH2LQ9NWQ4 482 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PPP1R3GB7ZBB8 358 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SLC33A1O00400 549 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 NUAK1O60285 661 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SCN2BO60939 215 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CHRNA5P30532 468 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 RASGEF1BQ0VAM2 473 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ZIK1Q3SY52 487 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 KLHL35Q6PF15 583 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF563Q8TA94 476 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 RDH11Q8TC12 318 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ATP13A3Q9H7F0 1226 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CLUHO75153 1309 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PRLP01236 227 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 GXYLT1Q4G148 440 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 FAM91A1Q658Y4 838 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ARMC10Q8N2F6 343 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 APBA2Q99767 749 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 RDH8Q9NYR8 311 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 GGA2Q9UJY4 613 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 RAB23Q9ULC3 237 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 BCKDKO14874 412 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ECHS1P30084 290 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 PRKAG1P54619 331 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SBK1Q52WX2 424 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 NEPROQ6NW34 567 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF730Q6ZMV8 503 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 SUSD6Q92537 303 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 DNAJC11Q9NVH1 559 aa8.77□□□□□ -1.01
NIPBL-201ENST00000282516 INO80Q9ULG1 1556 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-201ENST00000282516 CST1P01037 141 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 FAM153BP0C7A2 387 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SNRPD1P62314 119 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 AP5B1Q2VPB7 878 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 XKR6Q5GH73 641 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PPM1LQ5SGD2 360 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CXorf57Q6NSI4 855 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 GJB7Q6PEY0 223 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms