RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PSMD8P48556 350 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 HSPA13P48723 471 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 GEMP55040 296 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 FAM189BP81408 668 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 POU4F1Q01851 419 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 EIF4EBP2Q13542 120 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-201ENST00000277198 FLOT2Q14254 428 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 PDK3Q15120 406 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 SMAD1Q15797 465 aaKnown RBP13.02□□□□□ -0.32
C9orf3-201ENST00000277198 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 GPRIN1Q7Z2K8 1008 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.02□□□□□ -0.32
C9orf3-201ENST00000277198 ACVR1CQ8NER5 493 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 LPPQ93052 612 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 SCYL1Q96KG9 808 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 LRGUKQ96M69 825 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 GPR78Q96P69 363 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 FNIP2Q9P278 1114 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 ZDHHC2Q9UIJ5 367 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 LRFN2Q9ULH4 789 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 BRWD1Q9NSI6 2320 aa13.02□□□□□ -0.33
C9orf3-201ENST00000277198 TBKBP1A7MCY6 615 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 MATN3O15232 486 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 DLX3O60479 287 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 BCAS2O75934 225 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 IGLV3-25P01717 112 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 THP07101 528 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ME2P23368 584 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GABRB3P28472 473 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GSTT1P30711 240 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 POLE2P56282 527 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 FOLH1Q04609 750 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 DLG1Q12959 904 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ART3Q13508 389 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 LRRC36Q1X8D7 754 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GRAMD1BQ3KR37 738 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 KIAA0930Q6ICG6 404 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 UGT2A3Q6UWM9 527 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 AFAP1L2Q8N4X5 818 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 KDM1BQ8NB78 822 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CEP70Q8NHQ1 597 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 KCTD4Q8WVF5 259 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PGLYRP2Q96PD5 576 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 NUF2Q9BZD4 464 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CATSPERBQ9H7T0 1116 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GLOD4Q9HC38 313 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CHST12Q9NRB3 414 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 XPR1Q9UBH6 696 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CNOT11Q9UKZ1 510 aaKnown RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 FAM95CA0A1B0GW59 222 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GRM6O15303 877 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PHGDHO43175 533 aaKnown RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ATP5F1P24539 256 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ADRA1AP35348 466 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PBX3P40426 434 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GALNT1Q10472 559 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 GPM6BQ13491 265 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PEX6Q13608 980 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 MAPRE2Q15555 327 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 PSMD5Q16401 504 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 C2CD4AQ8NCU7 369 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 HIPK4Q8NE63 616 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
C9orf3-201ENST00000277198 ACBD6Q9BR61 282 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 TREX1Q9NSU2 369 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 CLIC5Q9NZA1 410 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 TCAF1Q9Y4C2 921 aa13.01□□□□□ -0.33
C9orf3-201ENST00000277198 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 H0YJX3 145 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 BMPR1AP36894 532 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 ABCG1P45844 678 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CD151P48509 253 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 THOP1P52888 689 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 TFF2Q03403 129 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 AP1ARQ63HQ0 302 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 DENND5AQ6IQ26 1287 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 FAM171BQ6P995 826 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 GALNT7Q86SF2 657 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 ZNF598Q86UK7 904 aaKnown RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 TAC4Q86UU9 113 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 TICAM1Q8IUC6 712 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 AGR3Q8TD06 166 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CALML6Q8TD86 181 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 DCUN1D1Q96GG9 259 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms