RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TANKQ92844 425 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 VPS50Q96JG6 964 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 MED10Q9BTT4 135 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 VPS45Q9NRW7 570 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 DCLK1O15075 740 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 ADAM23O75077 832 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SLC4A1P02730 911 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 MATN1P21941 496 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 TUBA4AP68366 448 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CREB5Q02930 508 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CDH17Q12864 832 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 RABL3Q5HYI8 236 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PERM1Q5SV97 790 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 ERMP1Q7Z2K6 904 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CAMK1DQ8IU85 385 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 FUNDC1Q8IVP5 155 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 DDIASQ8IXT1 998 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SH3RF2Q8TEC5 729 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 FICDQ9BVA6 458 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 ALG9Q9H6U8 611 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 IPO11Q9UI26 975 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 A8MT66 165 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 UBFD1O14562 309 aaKnown RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 TOMM70O94826 608 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 BFSP2Q13515 415 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 SQLEQ14534 574 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 BTLAQ7Z6A9 289 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 RNF34Q969K3 372 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 HDAC10Q969S8 669 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 KCNA7Q96RP8 456 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 UTP6Q9NYH9 597 aaKnown RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 BTRCQ9Y297 605 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 A0A0J9YYE9 177 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 H3BMM5 538 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 MAN1A2O60476 641 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 TSPAN1O60635 241 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ALDOCP09972 364 aaKnown RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 PCNAP12004 261 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ADRA1BP35368 520 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 HALP42357 657 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 KCNC1P48547 511 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 STX1BP61266 288 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 KCTD11Q693B1 232 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ZDHHC17Q8IUH5 632 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 RDH11Q8TC12 318 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 VPS33AQ96AX1 596 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ABHD8Q96I13 439 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 OLFM1Q99784 485 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 GBA3Q9H227 469 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ADNPQ9H2P0 1102 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 PCDH12Q9NPG4 1184 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 TMEM181Q9P2C4 612 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 ANKRD6Q9Y2G4 727 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 TRAF6Q9Y4K3 522 aa12.98□□□□□ -0.33
COL8A1-202ENST00000273342 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
COL8A1-202ENST00000273342 YJEFN3A6XGL0 299 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TOR1BO14657 336 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 HBP1O60381 514 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 HUS1O60921 280 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SERPINB7O75635 380 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SIX3O95343 332 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 IL10P22301 178 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 FASP25445 335 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ADSLP30566 484 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 NOS2P35228 1153 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TKTL1P51854 596 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 C1QTNF12Q5T7M4 302 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SCIMPQ6UWF3 145 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PIWIL4Q7Z3Z4 852 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ALDH16A1Q8IZ83 802 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PDZD8Q8NEN9 1154 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ANKRD49Q8WVL7 239 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 BORCS5Q969J3 196 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 MAELQ96JY0 434 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SMARCAD1Q9H4L7 1026 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 FANCEQ9HB96 536 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ANK1P16157 1881 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 KANSL1LA0AUZ9 987 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SLC22A2O15244 555 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 CBFA2T3O75081 653 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms