RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 MYBPC3Q14896 1274 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 PCDH9Q9HC56 1237 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 CATSPERZQ9NTU4 200 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 NR2C1P13056 603 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 FAM189A2Q15884 450 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 FUT11Q495W5 492 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 KLHDC7AQ5VTJ3 777 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 HAGHLQ6PII5 290 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 NIPA1Q7RTP0 329 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 OAFQ86UD1 273 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 PCDHA3Q9Y5H8 950 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 SREBF1P36956 1147 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 TEFMQ96QE5 360 aaKnown RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 RNF38Q9H0F5 515 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 MYPNQ86TC9 1320 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 TUBP50607 506 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF425Q6IV72 752 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 GMIPQ9P107 970 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 SPTLC1O15269 473 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 IL5RAQ01344 420 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 KLHL26Q53HC5 615 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 BROXQ5VW32 411 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 RAB11FIP2Q7L804 512 aa13.33□□□□□ -0.28
PRDM16-201ENST00000270722 HMGCRP04035 888 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 VANGL1Q8TAA9 524 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 HHATLQ9HCP6 504 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 RPL26L1Q9UNX3 145 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CCNE2O96020 404 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 PGAM1P18669 254 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CLK2P49760 499 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 SGF29Q96ES7 293 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF717Q9BY31 904 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 EPB41L1Q9H4G0 881 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 LOC100653049A0A140TA62 436 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 GNSP15586 552 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 REXO2Q9Y3B8 237 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 COLEC10Q9Y6Z7 277 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 NCK2O43639 380 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CASRP41180 1078 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 PPATQ06203 517 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 RNF44Q7L0R7 432 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 TCTEX1D2Q8WW35 142 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 MASP1P48740 699 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 SLC7A2P52569 658 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 DEFA5Q01523 94 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 LACTB2Q53H82 288 aaPredicted RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 MED28Q9H204 178 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 SNAP91O60641 907 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CTNNB1P35222 781 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 GSTM5P46439 218 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 ARFIP1P53367 373 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 AADACL4Q5VUY2 407 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 EIF5AL1Q6IS14 154 aaKnown RBP13.32□□□□□ -0.28
PRDM16-201ENST00000270722 LRRC69Q6ZNQ3 347 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
PRDM16-201ENST00000270722 CLDN4O14493 209 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 FAM20BO75063 409 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SCGNO76038 276 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 OR7A10O76100 309 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 RARGP13631 454 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 BLKP51451 505 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 IRF8Q02556 426 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 KYAT3Q6YP21 454 aaKnown RBP13.31□□□□□ -0.28
PRDM16-201ENST00000270722 FRMD7Q6ZUT3 714 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 GRIP2Q9C0E4 1043 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ROGDIQ9GZN7 287 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 MIR1-1HGQ9H1L0 117 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 THAP1Q9NVV9 213 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 TPST1O60507 370 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CD2P06729 351 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SERPINB5P36952 375 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 DEFA6Q01524 100 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 POU5F1Q01860 360 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms