RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 BNIPLQ7Z465 357 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TTC7BQ86TV6 843 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 GBP7Q8N8V2 638 aaPredicted RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 PNPLA1Q8N8W4 532 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 BRSK1Q8TDC3 778 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 WBP2Q969T9 261 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 UTP6Q9NYH9 597 aaKnown RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 MOCS1Q9NZB8 636 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ANGPTL3Q9Y5C1 460 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 CCT8L1PA6NM43 557 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 SMIM24O75264 130 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 HAUS5O94927 633 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ASMTLO95671 621 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 MT-CO1P00395 513 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 S100BP04271 92 aaPredicted RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 CCDC166P0CW27 439 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TYRP14679 529 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ITGALP20701 1170 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 BST1Q10588 318 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 CCDC6Q16204 474 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 LRRC73Q5JTD7 316 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TMEM135Q86UB9 458 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TMEM25Q86YD3 366 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 APCDD1Q8J025 514 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ZNF366Q8N895 744 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ACMSDQ8TDX5 336 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 MYO19Q96H55 970 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 WDR83Q9BRX9 315 aaKnown RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 CLPBQ9H078 707 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 LINC00597Q9H2U6 94 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 NOL6Q9H6R4 1146 aaKnown RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 TRMT6Q9UJA5 497 aaKnown RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
SSR3-201ENST00000265044 NCF1BA6NI72 391 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 NCF1CA8MVU1 366 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 VPS26AO75436 327 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ESRRAP11474 423 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 ALADP13716 330 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 NCF1P14598 390 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 FOXN2P32314 431 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 SLC1A2P43004 574 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 PGGT1BP53609 377 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RAB10P61026 200 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RFTN1Q14699 578 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 PTPRNQ16849 979 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 PLEKHG6Q3KR16 790 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 SRLQ86TD4 932 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 UCMAQ8WVF2 138 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 DCUN1D1Q96GG9 259 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 FEM1CQ96JP0 617 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 EGFL8Q99944 293 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ASB8Q9H765 288 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 DNAJC16Q9Y2G8 782 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 PRR23AA6NEV1 266 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 SUPT7LO94864 414 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 GOT2P00505 430 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 AHSGP02765 367 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RB1P06400 928 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 CRABP2P29373 138 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 HOXC13P31276 330 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 MC4RP32245 332 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 MAPK8P45983 427 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 STK19P49842 368 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 ALDH18A1P54886 795 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 PDE1CQ14123 709 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 RPS6KA2Q15349 733 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 CCDC153Q494R4 210 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 FNDC3BQ53EP0 1204 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 AARS2Q5JTZ9 985 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 C9orf50Q5SZB4 431 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 CNSTQ6PJW8 725 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 FAM151BQ6UXP7 276 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RANBP10Q6VN20 620 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ZNF557Q8N988 423 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 GDPD5Q8WTR4 605 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 KIFC1Q9BW19 673 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ABCG8Q9H221 673 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 TAS2R13Q9NYV9 303 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 TMEM216Q9P0N5 145 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 VWA7Q9Y334 891 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RALGAPA2Q2PPJ7 1873 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 SUPT3HB4E1H0 165 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 SUPT3HO75486 399 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 RPP40O75818 363 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 APOA4P06727 396 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 ALPIP09923 528 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 PABPC1P11940 636 aaKnown RBP9.36□□□□□ -0.91
SSR3-201ENST00000265044 GCAP28676 217 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 CRHR1P34998 444 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 NAGLUP54802 743 aa9.36□□□□□ -0.91
SSR3-201ENST00000265044 LMAN2Q12907 356 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms