RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZNF419Q96HQ0 510 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 KCNA7Q96RP8 456 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF385DQ9H6B1 395 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 EML4Q9HC35 981 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 GTF2IRD1Q9UHL9 959 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 CDC14AQ9UNH5 594 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NCF1BA6NI72 391 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NCF1CA8MVU1 366 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 HLA-DQB2P05538 268 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 HSPA8P11142 646 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NCF1P14598 390 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 ARNTP27540 789 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PNPLA4P41247 253 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PLCL1Q15111 1095 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 DNAJB14Q8TBM8 379 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 FBXL20Q96IG2 436 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 KIFC1Q9BW19 673 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NT5MQ9NPB1 228 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PNPLA3Q9NST1 481 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 TRAF6Q9Y4K3 522 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 ANGPT2O15123 496 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 INPP4BO15327 924 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 MMP3P08254 477 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 CTSHP09668 335 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 DARSP14868 501 aaKnown RBP12.46□□□□□ -0.42
CHMP3-201ENST00000263856 KPNA2P52292 529 aaKnown RBP12.46□□□□□ -0.42
CHMP3-201ENST00000263856 PRKCQQ04759 706 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 PTPRCAPQ14761 206 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 GPR107Q5VW38 600 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 FIBCD1Q8N539 461 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 DCBLD1Q8N8Z6 715 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 SCAMP5Q8TAC9 235 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 TUBGCP3Q96CW5 907 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 CDCA5Q96FF9 252 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 C3orf30Q96M34 536 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 GPR78Q96P69 363 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 SLC2A13Q96QE2 648 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 PRDM16Q9HAZ2 1276 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 GLOD4Q9HC38 313 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 MID1IP1Q9NPA3 183 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 DERAQ9Y315 318 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 TCAF1Q9Y4C2 921 aa12.46□□□□□ -0.42
CHMP3-201ENST00000263856 BRCA2P51587 3418 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 A0A0J9YYE9 177 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 TREHO43280 583 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 PENKP01210 267 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SMIM10L2AP0DMW4 78 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SMIM10L2BP0DMW5 78 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SCNN1AP37088 669 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 HADHAP40939 763 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 PSMD7P51665 324 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 LRP8Q14114 963 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 HERC3Q15034 1050 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SAMD4BQ5PRF9 694 aaKnown RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ERLEC1Q96DZ1 483 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 GAD1Q99259 594 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 PAAF1Q9BRP4 392 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SLC39A8Q9C0K1 460 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ADAMTS10Q9H324 1103 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 MROH8Q9H579 483 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SUCOQ9UBS9 1254 aaKnown RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 TRIP12Q14669 1992 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ANXA9O76027 345 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ZNF23P17027 643 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 CLCNKBP51801 687 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 YBX1P67809 324 aaKnown RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ECT2LQ008S8 904 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ZIK1Q3SY52 487 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 OTUD3Q5T2D3 398 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 KLHL35Q6PF15 583 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 POTEHQ6S545 545 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 ZMIZ2Q8NF64 920 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 SLC25A23Q9BV35 468 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 CLK4Q9HAZ1 481 aaKnown RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
CHMP3-201ENST00000263856 PLK2Q9NYY3 685 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 DOLKQ9UPQ8 538 aa12.45□□□□□ -0.42
CHMP3-201ENST00000263856 TARM1B6A8C7 271 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 H3BNH8 94 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 LTA4HP09960 611 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 LINC00032P0C843 101 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 GFAPP14136 432 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 PRKAA2P54646 552 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 SNX17Q15036 470 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 ANKDD1AQ495B1 522 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 NAT16Q8N8M0 369 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 NT5C3BQ969T7 300 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 VPS50Q96JG6 964 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 PAIP1Q9H074 479 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 OLAHQ9NV23 265 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms