RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CAMK1DQ8IU85 385 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 YAF2Q8IY57 180 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 CPA6Q8N4T0 437 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 MYLIPQ8WY64 445 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 MTBPQ96DY7 904 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 MYO19Q96H55 970 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 NECTIN4Q96NY8 510 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 IARS2Q9NSE4 1012 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 COLQQ9Y215 455 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 TRIM49D1C9J1S8 452 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 SIN3BO75182 1162 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 ECI2O75521 394 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 PIGNO95427 931 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 IGFBP4P22692 258 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 SLC6A11P48066 632 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 RUNX3Q13761 415 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 MYLK3Q32MK0 819 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 CARD16Q5EG05 197 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 ARMC12Q5T9G4 340 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 GRAMD4Q6IC98 578 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 PLPP6Q8IY26 295 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 CYB5D2Q8WUJ1 264 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 PDCD6IPQ8WUM4 868 aaKnown RBP23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 SORCS1Q8WY21 1168 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 SUSD6Q92537 303 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 TUBGCP5Q96RT8 1024 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 ATP13A3Q9H7F0 1226 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 DEC1Q9P2X7 70 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 KCTD3Q9Y597 815 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 PCDHB9Q9Y5E1 797 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 ARL5AQ9Y689 179 aa23.02■■□□□ 1.28
SMARCB1-201ENST00000263121 GOLGA8TH3BQL2 631 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 SRPRAP08240 638 aaKnown RBP23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 GKP32189 559 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 GRIA4P48058 902 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 RPL26P61254 145 aaKnown RBP23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 MESP2Q0VG99 397 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 PTPRNQ16849 979 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 ACCSLQ4AC99 568 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 GRTP1Q5TC63 336 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 CNPY4Q8N129 248 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 RYBPQ8N488 228 aaPredicted RBP23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 MDM1Q8TC05 714 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 FRS2Q8WU20 508 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 PIH1D2Q8WWB5 315 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 SMC6Q96SB8 1091 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 MCMBPQ9BTE3 642 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 CIPCQ9C0C6 399 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 SSU72Q9NP77 194 aaKnown RBP23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 NSMCE4AQ9NXX6 385 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 GGT7Q9UJ14 662 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 RPL26L1Q9UNX3 145 aaKnown RBP23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 SZT2Q5T011 3432 aa23.01■■□□□ 1.27
SMARCB1-201ENST00000263121 TMEM120BA0PK00 339 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 CRTAMO95727 393 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 MT-ND3P03897 115 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 ATP5BP06576 529 aaKnown RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 DLDP09622 509 aaKnown RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC8A1P32418 973 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 MDH1P40925 334 aaKnown RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 CCNHP51946 323 aaPredicted RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 BMPR2Q13873 1038 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 TAF1AQ15573 450 aaPredicted RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 SH2D5Q6ZV89 423 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 Q6ZVU0 165 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 C4orf33Q8N1A6 199 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 PHTF2Q8N3S3 785 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 MDGA1Q8NFP4 955 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 SERAC1Q96JX3 654 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 SMIM14Q96QK8 99 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 CPEB1Q9BZB8 566 aaKnown RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 TXNDC16Q9P2K2 825 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 EPS15L1Q9UBC2 864 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 PRPF4O43172 522 aaKnown RBP eCLIP23■■□□□ 1.27
SMARCB1-201ENST00000263121 KRT4P19013 534 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 PSMA3P25788 255 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 SERPINA4P29622 427 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 MPP2Q14168 576 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 TIFABQ6ZNK6 161 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 DPY19L3Q6ZPD9 716 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 STRA8Q7Z7C7 330 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 STYXQ8WUJ0 223 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 RBBP8Q99708 897 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 RPP25Q9BUL9 199 aaKnown RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 CAPS2Q9BXY5 557 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 ELOVL2Q9NXB9 296 aa23■■□□□ 1.27
SMARCB1-201ENST00000263121 USP15Q9Y4E8 981 aaPredicted RBP23■■□□□ 1.27
SMARCB1-201ENST00000263121 WASH3PC4AMC7 463 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 PRRT4C9JH25 899 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 AURKAO14965 403 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC7A4O43246 635 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 SHOX2O60902 331 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 POP4O95707 220 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 CHN1P15882 459 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 NNMTP40261 264 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 OPRD1P41143 372 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 ARSDP51689 593 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 ZNF140P52738 457 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 CSE1LP55060 971 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 GUCY1A3Q02108 690 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms