RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 ANKRD20A8PQ5CZ79 823 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 SLC9A4Q6AI14 798 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 ZDHHC24Q6UX98 284 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 FAM131BQ86XD5 332 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 ACTL9Q8TC94 416 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 CYB5D2Q8WUJ1 264 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 EDEM1Q92611 657 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 NTAN1Q96AB6 310 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 GDAP1L1Q96MZ0 367 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 RCOR3Q9P2K3 495 aaPredicted RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 ARID1BQ8NFD5 2236 aaPredicted RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 FLNCQ14315 2725 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 A0A1W2PR77 199 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 SIGLEC6O43699 453 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 KRT14P02533 472 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 KLKB1P03952 638 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 CYBBP04839 570 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 ITIH2P19823 946 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 TGM2P21980 687 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
SGCA-201ENST00000262018 RXRGP48443 463 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 NXPH1P58417 271 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 DYNLT1P63172 113 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 MSANTD2Q6P1R3 559 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 OXR1Q8N573 874 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 PQLC3Q8N755 202 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 CCDC89Q8N998 374 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
SGCA-201ENST00000262018 PCDH19Q8TAB3 1148 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 CCHCR1Q8TD31 782 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.5□□□□□ -0.25
SGCA-201ENST00000262018 ART4Q93070 314 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 SNF8Q96H20 258 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 TMEM245Q9H330 911 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 FBRSQ9HAH7 460 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 ZNF148Q9UQR1 794 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 ZNF510Q9Y2H8 683 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 LRRK2Q5S007 2527 aa13.5□□□□□ -0.25
SGCA-201ENST00000262018 TLR4O00206 839 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 APOL1O14791 398 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 SUV39H1O43463 412 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 SDC3O75056 442 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
SGCA-201ENST00000262018 IGLV3-25P01717 112 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 C7P10643 843 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 PECAM1P16284 738 aaPredicted RBP13.49□□□□□ -0.25
SGCA-201ENST00000262018 ZFXP17010 805 aaPredicted RBP13.49□□□□□ -0.25
SGCA-201ENST00000262018 CXCR3P49682 368 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 PLTPP55058 493 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 EFEMP1Q12805 493 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 C4orf17Q53FE4 359 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 CDCP2Q5VXM1 449 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 ZNF776Q68DI1 518 aaPredicted RBP13.49□□□□□ -0.25
SGCA-201ENST00000262018 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 SERAC1Q96JX3 654 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 FMO2Q99518 471 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 STARD5Q9NSY2 213 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 FBXL12Q9NXK8 326 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 SEPT3Q9UH03 358 aa13.49□□□□□ -0.25
SGCA-201ENST00000262018 TRIM38O00635 465 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 MCF2LO15068 1137 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 OPA1O60313 960 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 HMBSP08397 361 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 RBMS1P29558 406 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 CORO1AP31146 461 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 ADRA1BP35368 520 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 ARL4AP40617 200 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 EIF3EP60228 445 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 COG7P83436 770 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 CAV1Q03135 178 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 CALCOCO2Q13137 446 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 NME3Q13232 169 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 EIF4EBP2Q13542 120 aaPredicted RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 PPP6R3Q5H9R7 873 aaPredicted RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 EFHC2Q5JST6 749 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 ALS2CLQ60I27 953 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 TAC4Q86UU9 113 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms