RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 TRIM24O15164 1050 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 KRT37O76014 449 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 KRT38O76015 456 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 PRLP01236 227 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 GRIA4P48058 902 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 PDE1BQ01064 536 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 KCNMB4Q86W47 210 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 KDM1BQ8NB78 822 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 ST13P5Q8NFI4 369 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-216ENST00000259951 BLOC1S5Q8TDH9 187 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 UCMAQ8WVF2 138 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 TREX1Q9NSU2 369 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 PCDHB9Q9Y5E1 797 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 EYSQ5T1H1 3165 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 OTOL1A6NHN0 477 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-216ENST00000259951 CXorf49A8MYA2 514 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-216ENST00000259951 ANHXE9PGG2 379 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 HTRA2O43464 458 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-216ENST00000259951 FZD6O60353 706 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 PGLSO95336 258 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 ERVK-10P10266 1014 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 GJA4P35212 333 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 SLC6A11P48066 632 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 HTR4Q13639 388 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 E2F5Q15329 346 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 MTBPQ96DY7 904 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 MRGPRX3Q96LB0 322 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 ZNF641Q96N77 438 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-216ENST00000259951 SMYD2Q9NRG4 433 aa16.85■□□□□ 0.29
HLA-F-216ENST00000259951 C2orf81A6NN90 581 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 WASH3PC4AMC7 463 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 PDHA1P08559 390 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 HPDP32754 393 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CCNHP51946 323 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 PPP2R2AP63151 447 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 KDSRQ06136 332 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 THOC5Q13769 683 aaKnown RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 TAF1AQ15573 450 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CNGA3Q16281 694 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 QPCTQ16769 361 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 ESRP1Q6NXG1 681 aaKnown RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 KDM7AQ6ZMT4 941 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 TRABD2AQ86V40 505 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CAMK1DQ8IU85 385 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 UNC5BQ8IZJ1 945 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CYP4X1Q8N118 509 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 TERB1Q8NA31 727 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 OR6K2Q8NGY2 324 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CALML6Q8TD86 181 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 STYXQ8WUJ0 223 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CYB5D2Q8WUJ1 264 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 ZNF778Q96MU6 729 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CPNE1Q99829 537 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 FAM167BQ9BTA0 163 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 TRABDQ9H4I3 376 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 BRD9Q9H8M2 597 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 CNOT10Q9H9A5 744 aaKnown RBP16.84■□□□□ 0.29
HLA-F-216ENST00000259951 GTSE1Q9NYZ3 720 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 NUMBLQ9Y6R0 609 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 COL4A3Q01955 1670 aa16.84■□□□□ 0.29
HLA-F-216ENST00000259951 H3BQ06 376 aaPredicted RBP16.83■□□□□ 0.28
HLA-F-216ENST00000259951 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
HLA-F-216ENST00000259951 LDB2O43679 373 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 BNIP3LO60238 219 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 PIAS1O75925 651 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 VAPBO95292 243 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 SNRPAP09012 282 aaKnown RBP16.83■□□□□ 0.28
HLA-F-216ENST00000259951 GP5P40197 560 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 HSP90AA5PQ58FG0 334 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 GRTP1Q5TC63 336 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 DPY19L3Q6ZPD9 716 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 Q6ZVU0 165 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 GLT6D1Q7Z4J2 308 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 EXOC3L1Q86VI1 746 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 CSGALNACT1Q8TDX6 532 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 FRS2Q8WU20 508 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 SPOCK2Q92563 424 aa16.83■□□□□ 0.28
HLA-F-216ENST00000259951 CDX2Q99626 313 aaPredicted RBP16.83■□□□□ 0.28
HLA-F-216ENST00000259951 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 TBC1D3BA6NDS4 549 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 SLC7A4O43246 635 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 PIGNO95427 931 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 OPRD1P41143 372 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 PRAMEP78395 509 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 PTPRNQ16849 979 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 UGP2Q16851 508 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 TEDDM1Q5T9Z0 273 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 PACS1Q6VY07 963 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 SUGP1Q8IWZ8 645 aaKnown RBP16.82■□□□□ 0.28
HLA-F-216ENST00000259951 LMNTD2Q8IXW0 634 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 SRRM1Q8IYB3 904 aaKnown RBP16.82■□□□□ 0.28
HLA-F-216ENST00000259951 PIH1D2Q8WWB5 315 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 SORCS1Q8WY21 1168 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 HEPHQ9BQS7 1158 aa16.82■□□□□ 0.28
HLA-F-216ENST00000259951 SUV39H2Q9H5I1 410 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms