RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SERPINF2P08697 491 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 FGF3P11487 239 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 PRKCHP24723 683 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GDF5P43026 501 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GLUD2P49448 558 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 DDX39BQ13838 428 aaKnown RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 DSC3Q14574 896 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 GPNMBQ14956 572 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 HECTD3Q5T447 861 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 PKN3Q6P5Z2 889 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 NPAS4Q8IUM7 802 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MFN1Q8IWA4 741 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 MTBPQ96DY7 904 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 CASD1Q96PB1 797 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 EGFL8Q99944 293 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SEMA6AQ9H2E6 1030 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-201ENST00000258607 ZNHIT2Q9UHR6 403 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 SEC16AO15027 2179 aa9.15□□□□□ -0.94
CKAP2-201ENST00000258607 HACD1B0YJ81 288 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 PLK4O00444 970 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 BTN3A1O00481 513 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.95
CKAP2-201ENST00000258607 PEX11AO75192 247 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 SPAG6O75602 509 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 SPTBP11277 2137 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 KCNC1P48547 511 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 SLC11A2P49281 568 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 AGTR2P50052 363 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 GEMP55040 296 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 ABCE1P61221 599 aaKnown RBP9.15□□□□□ -0.95
CKAP2-201ENST00000258607 USP41Q3LFD5 358 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 TMC5Q6UXY8 1006 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 ZC3HC1Q86WB0 502 aaKnown RBP9.15□□□□□ -0.95
CKAP2-201ENST00000258607 APCDD1Q8J025 514 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 MIER2Q8N344 545 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 CYB5D2Q8WUJ1 264 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 ASIC4Q96FT7 647 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 LENG8Q96PV6 779 aaPredicted RBP9.15□□□□□ -0.95
CKAP2-201ENST00000258607 CPNE1Q99829 537 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 CCL26Q9Y258 94 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 HCFC2Q9Y5Z7 792 aa9.15□□□□□ -0.95
CKAP2-201ENST00000258607 NEDD8-MDP1E9PL57 170 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 INPPL1O15357 1258 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TRIM13O60858 407 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CIB2O75838 187 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 LINC00032P0C843 101 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CTSOP43234 321 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 LIMK2P53671 638 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CDKN2DP55273 166 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 NRG1Q02297 640 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 PCID2Q5JVF3 399 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 LPCAT4Q643R3 524 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TCEAL4Q96EI5 215 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 PHACTR1Q9C0D0 580 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SMOC2Q9H3U7 446 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TNFRSF12AQ9NP84 129 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TCF7L2Q9NQB0 619 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 UBA2Q9UBT2 640 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CACNA1IQ9P0X4 2223 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 DLX3O60479 287 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SIN3BO75182 1162 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 MAP2K2P36507 400 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SERPINB9P50453 376 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 GNA12Q03113 381 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CDK18Q07002 472 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TRIM71Q2Q1W2 868 aaKnown RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 HSF5Q4G112 596 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 ACSBG2Q5FVE4 666 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 RAB41Q5JT25 222 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SNX30Q5VWJ9 437 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CCSAPQ6IQ19 270 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 MBOAT1Q6ZNC8 495 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SPATA24Q86W54 205 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TDRPQ86YL5 185 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SIDT2Q8NBJ9 832 aaKnown RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 TXNDC5Q8NBS9 432 aaKnown RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CLHC1Q8NHS4 586 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SREK1Q8WXA9 508 aaKnown RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 RCN3Q96D15 328 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 BTN2A3PQ96KV6 586 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 CLSTN3Q9BQT9 956 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 FRMD8P1Q9BZ68 369 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-201ENST00000258607 ZDHHC6Q9H6R6 413 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 THAP1Q9NVV9 213 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SSX2IPQ9Y2D8 614 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 SH3BP1Q9Y3L3 701 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 YIPF1Q9Y548 306 aa9.14□□□□□ -0.95
CKAP2-201ENST00000258607 LCHNA4D1U4 455 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 M0QZQ0 153 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 TEX28O15482 410 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 MAP3K7O43318 606 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 DNAJA2O60884 412 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 TCEA3O75764 348 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 CXCL14O95715 111 aa9.13□□□□□ -0.95
CKAP2-201ENST00000258607 GLP2RO95838 553 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms