RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ATP13A3Q9H7F0 1226 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 UGT1A7Q9HAW7 530 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 UGT1A10Q9HAW8 530 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 UGT1A8Q9HAW9 530 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 C20orf96Q9NUD7 363 aaPredicted RBP9.52□□□□□ -0.89
NIP7-202ENST00000254941 DEC1Q9P2X7 70 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 EVLQ9UI08 416 aaPredicted RBP9.52□□□□□ -0.89
NIP7-202ENST00000254941 TRIOO75962 3097 aa9.52□□□□□ -0.89
NIP7-202ENST00000254941 ATG2BQ96BY7 2078 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CCDC78A2IDD5 438 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 FOXO6A8MYZ6 492 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 FAM155BO75949 473 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 KRT37O76014 449 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 KRT38O76015 456 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 VAPBO95292 243 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PGLSO95336 258 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ASLP04424 464 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SRPRAP08240 638 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 DLDP09622 509 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 CNTFP26441 200 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 NNMTP40261 264 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SERPINB9P50453 376 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 RPL26P61254 145 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 ACVR1Q04771 509 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 BCL2L1Q07817 233 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GRM2Q14416 872 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 MYLK3Q32MK0 819 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ACCSLQ4AC99 568 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 HSP90AA5PQ58FG0 334 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 LGSNQ5TDP6 509 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 MTSS1LQ765P7 747 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CAMK1DQ8IU85 385 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CNTN4Q8IWV2 1026 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 OR13J1Q8NGT2 312 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 OR6K2Q8NGY2 324 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 BLOC1S5Q8TDH9 187 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 FRS2Q8WU20 508 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PDCD6IPQ8WUM4 868 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 MYO19Q96H55 970 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 TUBGCP5Q96RT8 1024 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CPNE1Q99829 537 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 RPP25Q9BUL9 199 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 CIPCQ9C0C6 399 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ELOVL2Q9NXB9 296 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GTSE1Q9NYZ3 720 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
NIP7-202ENST00000254941 EPS15L1Q9UBC2 864 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SLC2A6Q9UGQ3 507 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 RIMKLBQ9ULI2 386 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 PCDHB9Q9Y5E1 797 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PSAT1Q9Y617 370 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 ARNTLO00327 626 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SOX1O00570 391 aaPredicted RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 TIMM44O43615 452 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 POP4O95707 220 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 CRTAMO95727 393 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PRKCGP05129 697 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SNRPAP09012 282 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 PIRTP0C851 137 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CREB1P16220 341 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SERPINA4P29622 427 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GDI1P31150 447 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GJA4P35212 333 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GRIA4P48058 902 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SLC6A11P48066 632 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CCNHP51946 323 aaPredicted RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 MESP2Q0VG99 397 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GRM3Q14832 879 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 QPCTQ16769 361 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PTPRNQ16849 979 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CARD16Q5EG05 197 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 ARMC12Q5T9G4 340 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GRAMD4Q6IC98 578 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PACS1Q6VY07 963 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 DPY19L3Q6ZPD9 716 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 Q6ZVU0 165 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 LPCAT1Q8NF37 534 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 STYXQ8WUJ0 223 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CYB5D2Q8WUJ1 264 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 MYLIPQ8WY64 445 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 MTBPQ96DY7 904 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 AGAP2Q99490 1192 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 GAS2L1Q99501 681 aaPredicted RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 TRMT61BQ9BVS5 477 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 TRABDQ9H4I3 376 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CNOT10Q9H9A5 744 aaKnown RBP9.51□□□□□ -0.89
NIP7-202ENST00000254941 NSMCE4AQ9NXX6 385 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 SLC17A6Q9P2U8 582 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 CD207Q9UJ71 328 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms