RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ALPIP09923 528 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 CTSEP14091 401 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 TSHRP16473 764 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ITIH2P19823 946 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 NDST2P52849 883 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 IRF4Q15306 451 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 CYTH1Q15438 398 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ACAD10Q6JQN1 1059 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ERAP2Q6P179 960 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 BRAT1Q6PJG6 821 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 CRTC1Q6UUV9 634 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 SDR16C5Q8N3Y7 309 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 NETO2Q8NC67 525 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ATL2Q8NHH9 583 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 CCDC97Q96F63 343 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 EXOC2Q96KP1 924 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ZNF641Q96N77 438 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 SUV39H2Q9H5I1 410 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 PADI4Q9UM07 663 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 ENTPD2Q9Y5L3 495 aa13.03□□□□□ -0.32
APOBEC3A-201ENST00000249116 LAMA5O15230 3695 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 TSPAN11A1L157 253 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 ARHGAP42A6NI28 874 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 EIF3CLB5ME19 914 aaKnown RBP13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 INSIG1O15503 277 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 RASGRP1O95267 797 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 PRB1P04280 392 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 GYPCP04921 128 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 HK3P52790 923 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 RHDQ02161 417 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 SPIDRQ14159 915 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 ASIC2Q16515 512 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 UGP2Q16851 508 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 HID1Q8IV36 788 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 EIF3CQ99613 913 aaKnown RBP13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 CCDC3Q9BQI4 270 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 ANP32EQ9BTT0 268 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 CLPBQ9H078 707 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 AIPL1Q9NZN9 384 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 PNMA8BQ9ULN7 279 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 COQ6Q9Y2Z9 468 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 PCDHGA8Q9Y5G5 932 aa13.02□□□□□ -0.33
APOBEC3A-201ENST00000249116 CHD5Q8TDI0 1954 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 ERVH48-1M5A8F1 160 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 KLK10O43240 276 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 DAPK3O43293 454 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 C6P13671 934 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 PRKCIP41743 596 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 MLLT3P42568 568 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 NFATC4Q14934 902 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 AGERQ15109 404 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 WSCD2Q2TBF2 565 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 TAF1BQ53T94 588 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 ENPP7Q6UWV6 458 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 PAF1Q8N7H5 531 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 ARL10Q8N8L6 244 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 SLC46A1Q96NT5 459 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 SYT11Q9BT88 431 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 APOOQ9BUR5 198 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 LRRC19Q9H756 370 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 PCDH12Q9NPG4 1184 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 GULP1Q9UBP9 304 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 AP4E1Q9UPM8 1137 aa13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.33
APOBEC3A-201ENST00000249116 CCDC187A0A096LP49 1063 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 J3KR12 359 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 PRAMEF11O60813 436 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 PALMO75781 387 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 PSMA2P25787 234 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 SERPINA4P29622 427 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 CASP14P31944 242 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 CSNK1DP48730 415 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 LIG3P49916 1009 aa13□□□□□ -0.33
APOBEC3A-201ENST00000249116 ZBED6P86452 979 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms