RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 RAB3IL1Q8TBN0 382 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 ZNF398Q8TD17 642 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 TMA16Q96EY4 203 aaKnown RBP23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 FEM1CQ96JP0 617 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 TRIM55Q9BYV6 548 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 PIDD1Q9HB75 910 aa23.52■■□□□ 1.35
SYNGR3-201ENST00000248121 SPTBN5Q9NRC6 3674 aaKnown RBP23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 UNC80Q8N2C7 3258 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 FGF3P11487 239 aaPredicted RBP23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 PAMP19021 973 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 KCNA4P22459 653 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 CDK18Q07002 472 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 ARHGAP15Q53QZ3 475 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 ATG16L1Q676U5 607 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 TDHQ8IZJ6 230 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 TNS4Q8IZW8 715 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 HJURPQ8NCD3 748 aaPredicted RBP23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 DDX50Q9BQ39 737 aaKnown RBP23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 MYLK2Q9H1R3 596 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 TDP1Q9NUW8 608 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 SEPT3Q9UH03 358 aa23.51■■□□□ 1.35
SYNGR3-201ENST00000248121 H0Y626 953 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 AURKAO14965 403 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 LDB2O43679 373 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 SNAP91O60641 907 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 LUC7L3O95232 432 aaKnown RBP23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 PAPSS2O95340 614 aaPredicted RBP23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 CD160O95971 181 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 CR2P20023 1033 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 DBN1Q16643 649 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 ZNF470Q6ECI4 717 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 NLRP9Q7RTR0 991 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 GBP7Q8N8V2 638 aaPredicted RBP23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 TIFAQ96CG3 184 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 TRIB3Q96RU7 358 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 LMAN2LQ9H0V9 348 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 NOD2Q9HC29 1040 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 MRPS23Q9Y3D9 190 aaKnown RBP23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 KCTD3Q9Y597 815 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 FGF19O95750 216 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 ARSDP51689 593 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 CYTH1Q15438 398 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 NEPROQ6NW34 567 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 DDI1Q8WTU0 396 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 PPM1EQ8WY54 764 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 ERP27Q96DN0 273 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 C1QTNF1Q9BXJ1 281 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 MUC3BQ9H195 1237 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 COPG2Q9UBF2 871 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 FBXO5Q9UKT4 447 aa23.5■■□□□ 1.35
SYNGR3-201ENST00000248121 CBX4O00257 560 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 EPOP01588 193 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 PFKLP17858 780 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 DDX6P26196 483 aaKnown RBP eCLIP23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 HADHAP40939 763 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 ARF5P84085 180 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 THOC5Q13769 683 aaKnown RBP23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 GALNT3Q14435 633 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 UGP2Q16851 508 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 RARS2Q5T160 578 aaKnown RBP23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 LINGO4Q6UY18 593 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 ATG14Q6ZNE5 492 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 SLC41A1Q8IVJ1 513 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 C10orf107Q8IVU9 208 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 ARID3BQ8IVW6 561 aaPredicted RBP23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 PNPLA1Q8N8W4 532 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 EXOC2Q96KP1 924 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 LRRC3BQ96PB8 259 aa23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 CINPQ9BW66 212 aaPredicted RBP23.49■■□□□ 1.35
SYNGR3-201ENST00000248121 A0A0G2JND7 137 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 CCL22O00626 93 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 PHGDHO43175 533 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 DNAJC8O75937 253 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 HAUS5O94927 633 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 SERPINF2P08697 491 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 CSKP41240 450 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 NCALDP61601 193 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 ZNF77Q15935 545 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 CPXM2Q8N436 756 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 LEMD2Q8NC56 503 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 MRPL38Q96DV4 380 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 IFT43Q96FT9 208 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 FAM167BQ9BTA0 163 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 LINC00597Q9H2U6 94 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 ANKRD36A6QL64 1941 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 SLC35E2BP0CK96 405 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 HLA-DPA1P20036 260 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 SAT1P21673 171 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 HYAL1Q12794 435 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 USP10Q14694 798 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 CCDC153Q494R4 210 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 HSF5Q4G112 596 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 ZNF789Q5FWF6 425 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 RNF135Q8IUD6 432 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 CEP97Q8IW35 865 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 RSPRY1Q96DX4 576 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 LRRC37BQ96QE4 947 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 OR51B4Q9Y5P0 310 aa23.48■■□□□ 1.35
SYNGR3-201ENST00000248121 ITM2AO43736 263 aa23.47■■□□□ 1.35
SYNGR3-201ENST00000248121 ZMPSTE24O75844 475 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms