RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CDH15P55291 814 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 NFE2Q16621 373 aaPredicted RBP13.78□□□□□ -0.2
NCLN-201ENST00000246117 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 MFN1Q8IWA4 741 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 ACVR1CQ8NER5 493 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 OR13C4Q8NGS5 318 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 SMOQ99835 787 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 SLC25A23Q9BV35 468 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 CLPBQ9H078 707 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 LIN28AQ9H9Z2 209 aaKnown RBP13.78□□□□□ -0.2
NCLN-201ENST00000246117 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 CCDC189A1A4V9 331 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 J3KR12 359 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
NCLN-201ENST00000246117 FGF3P11487 239 aaPredicted RBP13.78□□□□□ -0.2
NCLN-201ENST00000246117 ARSAP15289 507 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 IL4RP24394 825 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 DGCR6Q14129 220 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 PPP1R3AQ16821 1122 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 SHKBP1Q8TBC3 707 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 HMCESQ96FZ2 354 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 CRTAC1Q9NQ79 661 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 KLQ9UEF7 1012 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
NCLN-201ENST00000246117 ZBTB14O43829 449 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 DLX3O60479 287 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 TLR5O60602 858 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 CLASP2O75122 1294 aaKnown RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 TNFAIP8O95379 198 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 CLIC3O95833 236 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 ALDH2P05091 517 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 HIST1H2AGP0C0S8 130 aaPredicted RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 HIST1H2ADP20671 130 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 PRKCHP24723 683 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 CCL23P55773 120 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 COL9A2Q14055 689 aaPredicted RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 LIN52Q52LA3 116 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 HECTD2Q5U5R9 776 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 MBLAC2Q68D91 279 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 NPWQ8N729 165 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 MAPK15Q8TD08 544 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 HIST1H2AHQ96KK5 128 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 HIST1H2AJQ99878 128 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 MRPL57Q9BQC6 102 aaKnown RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 H2AFJQ9BTM1 129 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.2
NCLN-201ENST00000246117 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.2
NCLN-201ENST00000246117 PRR23AA6NEV1 266 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 AXIN1O15169 862 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 LRATO95237 230 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 HSPA1AP0DMV8 641 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 HSPA1BP0DMV9 641 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 CLDN10P78369 228 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 CHRNB3Q05901 458 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 FRG1Q14331 258 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 SMAD5Q99717 465 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 RIC8BQ9NVN3 520 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 A0A0U1RQS6 177 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 CCDC154A6NI56 674 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 E9PAM4 449 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 AURKAO14965 403 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 MAN1A2O60476 641 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 NTRK1P04629 796 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 MLNP12872 115 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 EFNA1P20827 205 aaPredicted RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 AXLP30530 894 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 VAC14Q08AM6 782 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 PLD1Q13393 1074 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 TOP6BLQ8N6T0 577 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 UBR7Q8N806 425 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 CASP10Q92851 521 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 CDK15Q96Q40 435 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
NCLN-201ENST00000246117 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
NCLN-201ENST00000246117 ASCC3Q8N3C0 2202 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 A0A0J9YYE9 177 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 C1orf232A0A0U1RR37 186 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 E7ESA3 106 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 HLA-DQB2P05538 268 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 MAPK11Q15759 364 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 TSPAN14Q8NG11 270 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms