RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 EXOC2Q96KP1 924 aa16.32■□□□□ 0.2
CLPP-201ENST00000245816 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
CLPP-201ENST00000245816 ZNF599Q96NL3 588 aa16.32■□□□□ 0.2
CLPP-201ENST00000245816 LENG8Q96PV6 779 aaPredicted RBP16.32■□□□□ 0.2
CLPP-201ENST00000245816 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
CLPP-201ENST00000245816 ASXL3Q9C0F0 2248 aa16.32■□□□□ 0.2
CLPP-201ENST00000245816 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
CLPP-201ENST00000245816 A0A0A6YYK5 440 aaPredicted RBP16.31■□□□□ 0.2
CLPP-201ENST00000245816 SPTY2D1-AS1A0A0U1RR47 76 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 FFAR2O15552 330 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 NRDCO43847 1150 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 MMP20O60882 483 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 PIGNO95427 931 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 IGSF6O95976 241 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 C1SP09871 688 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 IL4RP24394 825 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 IGFALSP35858 605 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 MAGEA1P43355 309 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 SUOXP51687 545 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 CDH6P55285 790 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 SEMG2Q02383 582 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 KRT81Q14533 505 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 SPA17Q15506 151 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 INAVAQ3KP66 663 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 KIAA1161Q6NSJ0 714 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 GDPD4Q6W3E5 623 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 KYAT3Q6YP21 454 aaKnown RBP16.31■□□□□ 0.2
CLPP-201ENST00000245816 RYBPQ8N488 228 aaPredicted RBP16.31■□□□□ 0.2
CLPP-201ENST00000245816 NPWQ8N729 165 aa16.31■□□□□ 0.2
CLPP-201ENST00000245816 HNRNPLLQ8WVV9 542 aaKnown RBP16.31■□□□□ 0.2
CLPP-201ENST00000245816 CELF6Q96J87 481 aaKnown RBP16.31■□□□□ 0.2
CLPP-201ENST00000245816 MUSKO15146 869 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 MAGEC1O60732 1142 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 AMPD1P23109 780 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 SSR1P43307 286 aaKnown RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 RHOAP61586 193 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 PTAR1Q7Z6K3 402 aaPredicted RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 RBFAQ8N0V3 343 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 TP53I13Q8NBR0 393 aaPredicted RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 KCTD6Q8NC69 237 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 ASB12Q8WXK4 309 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 TUBGCP5Q96RT8 1024 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 DKK3Q9UBP4 350 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 IPO11Q9UI26 975 aaKnown RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 COQ6Q9Y2Z9 468 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 EPN1Q9Y6I3 576 aaPredicted RBP16.3■□□□□ 0.2
CLPP-201ENST00000245816 ATRXP46100 2492 aa16.3■□□□□ 0.2
CLPP-201ENST00000245816 A6NNZ2 444 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 K7ESM1 405 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 TSPAN6O43657 245 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 GCATO75600 419 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 PALMO75781 387 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 CSF2P04141 144 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 PRKCGP05129 697 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 JUPP14923 745 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 RENBPP51606 427 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 DPYSL3Q14195 570 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 MESDQ14696 234 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 PAFAH1B3Q15102 231 aaKnown RBP16.29■□□□□ 0.2
CLPP-201ENST00000245816 CDCP2Q5VXM1 449 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 LRRC8AQ8IWT6 810 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 CCDC112Q8NEF3 446 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 FAM174AQ8TBP5 190 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 FATE1Q969F0 183 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 APOLD1Q96LR9 279 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 ZNF641Q96N77 438 aaPredicted RBP16.29■□□□□ 0.2
CLPP-201ENST00000245816 BBC3Q96PG8 261 aaPredicted RBP16.29■□□□□ 0.2
CLPP-201ENST00000245816 SP110Q9HB58 689 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 PCDHA13Q9Y5I0 950 aa16.29■□□□□ 0.2
CLPP-201ENST00000245816 A0A1W2PNU3 283 aaPredicted RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 TSPAN11A1L157 253 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 SOWAHDA6NJG2 315 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 SCAMP1O15126 338 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 NDUFA10O95299 355 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 CELA2BP08218 269 aaPredicted RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 NME1P15531 152 aaKnown RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 GM2AP17900 193 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 TAS2R40P59535 323 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 PDE1CQ14123 709 aaPredicted RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 DCBLD1Q8N8Z6 715 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 ZNF548Q8NEK5 533 aaPredicted RBP16.28■□□□□ 0.2
CLPP-201ENST00000245816 IFT43Q96FT9 208 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 PSKH2Q96QS6 385 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 ETNK2Q9NVF9 386 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 DNAJC28Q9NX36 388 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 SEPT3Q9UH03 358 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 PCDHB1Q9Y5F3 818 aa16.28■□□□□ 0.2
CLPP-201ENST00000245816 A0A087WV48 116 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 TTC24A2A3L6 582 aaPredicted RBP16.27■□□□□ 0.2
CLPP-201ENST00000245816 BTNL10A8MVZ5 291 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 DFFAO00273 331 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms