RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 FPGSQ05932 587 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 DDX39BQ13838 428 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 ADGRE1Q14246 886 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ZNF792Q3KQV3 632 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 SGO1Q5FBB7 561 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ARCQ7LC44 396 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 KCNMB4Q86W47 210 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 RNF148Q8N7C7 305 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 CNDP1Q96KN2 507 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ASPSCR1Q9BZE9 553 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A7Q9HAW7 530 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A10Q9HAW8 530 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 UGT1A8Q9HAW9 530 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 MORF4L1Q9UBU8 362 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 PACSIN3Q9UKS6 424 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 Q9Y3F1 56 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 DENRO43583 198 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 PIAS1O75925 651 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 OXSR1O95747 527 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 ZNF23P17027 643 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 LILRA4P59901 499 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 NAB1Q13506 487 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 CAMK2GQ13555 558 aaPredicted RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 DPYSQ14117 519 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 GRB14Q14449 540 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 FASTKD3Q14CZ7 662 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 TLR1Q15399 786 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 FAM187BQ17R55 369 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 SCARA3Q6AZY7 606 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 SLC39A4Q6P5W5 647 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 EFL1Q7Z2Z2 1120 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 C11orf96Q7Z7L8 435 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ZBTB46Q86UZ6 589 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 NPAS4Q8IUM7 802 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 CHPFQ8IZ52 775 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 PAWRQ96IZ0 340 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 ZCCHC2Q9C0B9 1178 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 PIH1D1Q9NWS0 290 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 TRIM64CA6NLI5 447 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 NOTOA8MTQ0 251 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ANGPT2O15123 496 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 PHGDHO43175 533 aaKnown RBP11.05□□□□□ -0.64
COPA-201ENST00000241704 TYROBPO43914 113 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 TLR5O60602 858 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 ZMPSTE24O75844 475 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 RBP1P09455 135 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 MAPK10P53779 464 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 SLC26A9Q7LBE3 791 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 RASAL3Q86YV0 1011 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 HEPHQ9BQS7 1158 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 MECRQ9BV79 373 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 BTAF1O14981 1849 aa11.05□□□□□ -0.64
COPA-201ENST00000241704 TRPC5OSA6NMA1 111 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 NDUFS2O75306 463 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 BANF1O75531 89 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 CLTBP09497 229 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 ARHGDIAP52565 204 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 PKNOX1P55347 436 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 POU4F1Q01851 419 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 GSTM4Q03013 218 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 ILF2Q12905 390 aaKnown RBP11.04□□□□□ -0.64
COPA-201ENST00000241704 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 PPP4R4Q6NUP7 873 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 PMF1Q6P1K2 205 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 SNX32Q86XE0 403 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 ACTRT2Q8TDY3 377 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 CXorf21Q9HAI6 301 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 SYTL2Q9HCH5 934 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 USP12O75317 370 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 GSNP06396 782 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 DLDP09622 509 aaKnown RBP11.04□□□□□ -0.64
COPA-201ENST00000241704 PSMB4P28070 264 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 KRT6CP48668 564 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 SMARCB1Q12824 385 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 ACOX1Q15067 660 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 RAP1GAP2Q684P5 730 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 RHBDF2Q6PJF5 856 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 MON1AQ86VX9 555 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 PPP1R16AQ96I34 528 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 CPNE1Q99829 537 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 TBL1YQ9BQ87 522 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 RAD21L1Q9H4I0 556 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 ARVCFO00192 962 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 CLOCKO15516 846 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 CCNT2O60583 730 aaKnown RBP11.04□□□□□ -0.64
COPA-201ENST00000241704 SUPT7LO94864 414 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 MPOP05164 745 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 SERPINA4P29622 427 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 GLRBP48167 497 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
COPA-201ENST00000241704 PTAR1Q7Z6K3 402 aaPredicted RBP11.04□□□□□ -0.64
COPA-201ENST00000241704 DENND1CQ8IV53 801 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms