RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CD68P34810 354 aaPredicted RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 GARSP41250 739 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 ETV1P50549 477 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 LRRC8EQ6NSJ5 796 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 BIRC7Q96CA5 298 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 CCSER2Q9H7U1 834 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ITM2CQ9NQX7 267 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 FARSBQ9NSD9 589 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 RBAKQ9NYW8 714 aaPredicted RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 TMEM181Q9P2C4 612 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 FPGSQ05932 587 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 SAMD4BQ5PRF9 694 aaKnown RBP13.09□□□□□ -0.31
MSH2-201ENST00000233146 SEL1L3Q68CR1 1132 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 NXNL1Q96CM4 212 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
MSH2-201ENST00000233146 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 PAK1IP1Q9NWT1 392 aaPredicted RBP13.09□□□□□ -0.31
MSH2-201ENST00000233146 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 F8VP50 259 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 GRID2O43424 1007 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 PPP1R11O60927 126 aaPredicted RBP13.09□□□□□ -0.31
MSH2-201ENST00000233146 PRKD3O94806 890 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 ALBP02768 609 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 OSBPP22059 807 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 PCMT1P22061 227 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 MMP8P22894 467 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 FAM214AQ32MH5 1076 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 NXNL2Q5VZ03 156 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 STRADAQ7RTN6 431 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 EID3Q8N140 333 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
MSH2-201ENST00000233146 CPXM1Q96SM3 734 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 EPS8L2Q9H6S3 715 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 PCSK1NQ9UHG2 260 aa13.09□□□□□ -0.31
MSH2-201ENST00000233146 DHRS12A0PJE2 317 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 TMEM191CA6NGB0 347 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 TISP43B9A030 160 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.31
MSH2-201ENST00000233146 IL10P22301 178 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 VBP1P61758 197 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 GK5Q6ZS86 529 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 DEPDC1BQ8WUY9 529 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 HDAC2Q92769 488 aaKnown RBP13.08□□□□□ -0.31
MSH2-201ENST00000233146 FAF2Q96CS3 445 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 ING2Q9H160 280 aa13.08□□□□□ -0.31
MSH2-201ENST00000233146 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 AP3D1O14617 1153 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 CHRNA1P02708 482 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 MPSTP25325 297 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ALDH4A1P30038 563 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ZNF76P36508 570 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
MSH2-201ENST00000233146 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.32
MSH2-201ENST00000233146 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 UNC5BQ8IZJ1 945 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 HDAC10Q969S8 669 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 HSFY1Q96LI6 401 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 PI15O43692 258 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 PDGFAP04085 211 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 GTF2E2P29084 291 aaKnown RBP13.08□□□□□ -0.32
MSH2-201ENST00000233146 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ENPEPQ07075 957 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
MSH2-201ENST00000233146 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ELMO3Q96BJ8 720 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 LRRC39Q96DD0 335 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
MSH2-201ENST00000233146 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 TRIM15Q9C019 465 aa13.08□□□□□ -0.32
MSH2-201ENST00000233146 ZNF99A8MXY4 864 aaPredicted RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 TPST1O60507 370 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 CFHP08603 1231 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ATF6P18850 670 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ACVR2AP27037 513 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 NOMO3P69849 1222 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 STX5Q13190 355 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 PARP15Q460N3 678 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ZNF484Q5JVG2 852 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 COLEC12Q5KU26 742 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms