RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 TBCELQ5QJ74 424 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 SPPL2CQ8IUH8 684 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 RYBPQ8N488 228 aaPredicted RBP14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 POMKQ9H5K3 350 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 FANCEQ9HB96 536 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CLDN25C9JDP6 229 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 MRASO14807 208 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 AURKAO14965 403 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 CLPXO76031 633 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 ARIH2O95376 493 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 JCHAINP01591 159 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 RBP5P82980 135 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 GHRHRQ02643 423 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 CXCL9Q07325 125 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 CAPRIN1Q14444 709 aaKnown RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 RSBN1Q5VWQ0 802 aaPredicted RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 ELMO2Q96JJ3 720 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 SPATA33Q96N06 139 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 ZSCAN5BA6NJL1 495 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 EEF2KO00418 725 aaKnown RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 UBDO15205 165 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 LMO2P25791 158 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 TPD52P55327 224 aaPredicted RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 PAGE2BQ5JRK9 111 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 C4orf22Q6V702 233 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 MMAAQ8IVH4 418 aaKnown RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 TANKQ92844 425 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 ING2Q9H160 280 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 UPF3AQ9H1J1 476 aaKnown RBP14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 EVPLQ92817 2033 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
PCDHB3-201ENST00000231130 FAM72CH0Y354 149 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 MPOP05164 745 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 NFKB1P19838 968 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 LRPAP1P30533 357 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 IDUAP35475 653 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 TRPC1P48995 793 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 NDUFV1P49821 464 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC12A2P55011 1212 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 PRKCQQ04759 706 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SELENBP1Q13228 472 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 GRM1Q13255 1194 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ZIK1Q3SY52 487 aaPredicted RBP14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 FAM72AQ5TYM5 149 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 FAM72DQ6L9T8 149 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 HMBOX1Q6NT76 420 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 AKAP14Q86UN6 197 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 FAM72BQ86X60 149 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 DHFR2Q86XF0 187 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 LSMEM2Q8N112 164 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ZNF597Q96LX8 424 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 NAT9Q9BTE0 207 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 CCDC90BQ9GZT6 254 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 C2orf40Q9H1Z8 148 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SMOXQ9NWM0 555 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ACOT9Q9Y305 439 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ZCWPW2A0A1B0GU75 182 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 CLASP2O75122 1294 aaKnown RBP14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 IL18RAPO95256 599 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 MLNP12872 115 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 PTPRAP18433 802 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ADSLP30566 484 aaPredicted RBP14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 PRKAA2P54646 552 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 PHC1P78364 1004 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 REP15Q6BDI9 236 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC22A16Q86VW1 577 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 TNIP2Q8NFZ5 429 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SLCO4A1Q96BD0 722 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ASB9Q96DX5 294 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ZFYVE19Q96K21 471 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 GMLQ99445 158 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 HMG20AQ9NP66 347 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 CLDN5O00501 218 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 B4GAT1O43505 415 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 TIMM44O43615 452 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 ASNA1O43681 348 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 MAN1A2O60476 641 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 TADA2AO75478 443 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 KRT8P05787 483 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 CHRM3P20309 590 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 GRM5P41594 1212 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 SEPHS1P49903 392 aa14.23□□□□□ -0.13
PCDHB3-201ENST00000231130 RHDQ02161 417 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms