RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CYP4F3Q08477 520 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 BAP1Q92560 729 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 NEK6Q9HC98 313 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 C3orf18Q9UK00 162 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RAP2CQ9Y3L5 183 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PPLO60437 1756 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 HNF4AP41235 474 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KLHL23Q8NBE8 558 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RP9Q8TA86 221 aaKnown RBP11.61□□□□□ -0.55
LAMA4-201ENST00000230538 ACMSDQ8TDX5 336 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 MAT2BQ9NZL9 334 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 GGA2Q9UJY4 613 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 BTNL10A8MVZ5 291 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KLRC4O43908 158 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 MAFO75444 373 aaPredicted RBP11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KHDRBS3O75525 346 aaKnown RBP11.61□□□□□ -0.55
LAMA4-201ENST00000230538 UNC5CO95185 931 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CTPS1P17812 591 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 TTKP33981 857 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PTDSS1P48651 473 aaKnown RBP11.61□□□□□ -0.55
LAMA4-201ENST00000230538 BNIP2Q12982 314 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PDK3Q15120 406 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CES5AQ6NT32 575 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 HAS1Q92839 578 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 TINF2Q9BSI4 451 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CRISPLD1Q9H336 500 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 OGDHLQ9ULD0 1010 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KRT36O76013 467 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ITGA2BP08514 1039 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ANPEPP15144 967 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CXCL17Q6UXB2 119 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SERPINA13PQ6UXR4 307 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PHF13Q86YI8 300 aaPredicted RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 HJURPQ8NCD3 748 aaPredicted RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 OR4A15Q8NGL6 344 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ITCHQ96J02 903 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PIGUQ9H490 435 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LRRC19Q9H756 370 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ERGIC3Q9Y282 383 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ERN1O75460 977 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 AP5B1Q2VPB7 878 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 AKIRIN2Q53H80 203 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 METTL3Q86U44 580 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 RASAL3Q86YV0 1011 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LRRC49Q8IUZ0 686 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LPPQ93052 612 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 FNDC11Q9BVV2 318 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 COMMD9Q9P000 198 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SLC27A5Q9Y2P5 690 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 hCG_1818297A0A087WSY0 165 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CCDC182A6NF36 153 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 BIRC5O15392 142 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 FARP2O94887 1054 aaPredicted RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CSH1P0DML2 217 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CSH2P0DML3 217 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 MAXP61244 160 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 FMO1Q01740 532 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PDK4Q16654 411 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PACS1Q6VY07 963 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 TMEM161BQ8NDZ6 487 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SLC47A1Q96FL8 570 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 MRPS7Q9Y2R9 242 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SNAP91O60641 907 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 AVILO75366 819 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 IL1BP01584 269 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 ADAMTSL2Q86TH1 951 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LINGO1Q96FE5 620 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 EBNA1BP2Q99848 306 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CDT1Q9H211 546 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LRMDAQ9H2I8 198 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 GTPBP1O00178 669 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 CCT3P49368 545 aaKnown RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 MYBPC1Q00872 1141 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 BST1Q10588 318 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PCBP1Q15365 356 aaKnown RBP eCLIP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SIX5Q8N196 739 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 AMER2Q8N7J2 671 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PLEKHG4BQ96PX9 1271 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PDCD10Q9BUL8 212 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 OR10H3O60404 316 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 GNRH1P01148 92 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 SERPINA6P08185 405 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 PIRTP0C851 137 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 BMP7P18075 431 aa11.6□□□□□ -0.55
LAMA4-201ENST00000230538 DRD4P21917 467 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms